Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1040 235 9e-60 seq841 78.8 1e-12 >seq1040 Length=62949 Score = 235 bits (260), Expect = 9e-60 Identities = 201/243 (83%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| Sbjct 2394 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 2336 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC-CAACCATAGTCG 135 | |||| ||||| | || | |||||||||||||| | || | || || Sbjct 2335 A-CTTCATGCGGCTGAATACCGCTTGTCCCTCTAAGAAGTCTTCCGGACTTGTTTATCCG 2277 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 ||| ||||||| ||| || |||||| ||||||||||||| |||||||||||||||| Sbjct 2276 ATGA--CTATTTAATAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCACT 2219 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| Sbjct 2218 CCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTCTCAATCT 2159 Query 256 GTC 258 ||| Sbjct 2158 GTC 2156 >seq841 Length=73796 Score = 78.8 bits (86), Expect = 1e-12 Identities = 61/73 (84%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 |||||| ||| |||||||||||||||| || ||||||||||| | | || || ||| || Sbjct 68384 TTATCGAAATAAACCAGACAAATCACTTCAACAACTAAGAACTGTCGTGTTCCGCCAACC 68325 Query 229 ATAGAATCAAGAA 241 ||||| ||||||| Sbjct 68324 ATAGAGTCAAGAA 68312 Score = 73.4 bits (80), Expect = 6e-11 Identities = 55/65 (85%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 |||||| ||| |||||||||||||||| |||||||||||||| | | || || ||| || Sbjct 68526 TTATCGAAATAAACCAGACAAATCACTTCACCAACTAAGAACTGTCGTGTTCCGCCAACC 68467 Query 229 ATAGA 233 ||||| Sbjct 68466 ATAGA 68462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796555230510