Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1040 212 1e-52 seq4304 87.8 3e-15 >seq1040 Length=62949 Score = 212 bits (234), Expect = 1e-52 Identities = 205/258 (79%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| |||||| ||| |||||||||||||||| Sbjct 2298 CTTCTTAGAGGGACAAGCGGTATTCAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 2355 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||| || || || | | | | Sbjct 2356 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCAGCGTGCTG-TAA 2414 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | |||| ||||| | ||||| | | ||| || |||| | ||||| | | |||| Sbjct 2415 CCATTGCCGAAAGGTATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 2474 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | ||| |||||||||| ||||||||| | | ||||||||| | |||||||| Sbjct 2475 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 2534 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 2535 ACGTCCCTGCCCTTTGTA 2552 >seq4304 Length=15894 Score = 87.8 bits (96), Expect = 3e-15 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 241 TAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCA 300 || || ||||||||||| | ||| |||||||||| | ||||||| | | || ||||| Sbjct 2062 TAAAGAATTGCAATTATCTCCCTTGAACGAGGAATTCATAGTAAGTGTGAGTTATCAGTT 2003 Query 301 CGCGTTGATTACGTCCCTGCCCTTTGTA 328 | |||||||||||||| ||||||||||| Sbjct 2002 CACGTTGATTACGTCCGTGCCCTTTGTA 1975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946899642880