Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20lumbricoides_20[genbank_20GCA_5F000951055.1_202014-09-24] 31,710 sequences; 316,975,410 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4321 168 2e-39 seq817 168 2e-39 seq7889 100 9e-19 >seq4321 Length=15796 Score = 168 bits (186), Expect = 2e-39 Identities = 95/96 (99%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14055 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 14114 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||||||| |||||||||||||||||||||||||| Sbjct 14115 CTTCACTTTTACATTCAGAGCACTGGGCAGAAATCA 14150 >seq817 Length=75104 Score = 168 bits (186), Expect = 2e-39 Identities = 186/244 (76%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 166 AGACCAGTTC-CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACT- 223 || ||||||| || | | || |||||||| || |||| | || | ||||||||||| Sbjct 73646 AGCCCAGTTCTCGTCTTACCGAATAAGTAAAGAATCGATGAAAGTGGAGGTATTTCACTG 73587 Query 224 TGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTA 283 | ||||| || ||||| ||||| |||| ||||||| | | |||||| | | |||||| Sbjct 73586 TTGGCCGA--CGCCTCCCTCTTATGCTACTCCTCTCATGACTCTTCACAGAATTGGACTA 73529 Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343 |||||||||| || || |||||||||| || ||| | || ||| | |||| | |||| Sbjct 73528 GAGTCAAGCTTAAAAGTGTCTTCTTTCTCCACTGTCTTCGGCAAAGCTTTTCCTTGGGCT 73469 Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403 || | || |||||| |||||||||| |||| || ||||||| ||||||||||| || | Sbjct 73468 GTTGCTTTGCTAGAAGGTAGATAGGGGCAGTAGGGATCTCGTCAATCCATTCATACGGAT 73409 Query 404 CACT 407 |||| Sbjct 73408 CACT 73405 >seq7889 Length=5538 Score = 100 bits (110), Expect = 9e-19 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||||| ||| |||| || ||| |||| ||||||||||||||||||| | Sbjct 2649 CTTTTGCTCTACAAGAGGTTTCCGTCCTCTCTGAGCTAGCCTTAGGACACCTGCGTTACG 2590 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATC 116 ||| ||| |||| ||||||||| ||||||||| ||| | | |||| || Sbjct 2589 ATTTGACAAATGTACCGCCCCAGTGAAACTCCCCGCCTAAAACTGTCGTC 2540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634681478080