Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq88 131 3e-28 seq392 89.7 9e-16 >seq88 Length=586650 Score = 131 bits (144), Expect = 3e-28 Identities = 183/248 (74%), Gaps = 8/248 (3%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTG-TTCAAAGCAGGCCTT-TGCTCGAATACATTAGCATG 131 ||||||||||||||||||||||| ||| ||| || ||| || |||| | | ||||| Sbjct 530882 TTTACTTTGAAAAAATTAGAGTGCTTC--AGCCGGGCTTATGTCTGAATGCTTGTGCATG 530939 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||||| |||||||||||||||||||| | | | ||||| || Sbjct 530940 GAATAATAGAATAGGA-TCCCGGTTCTATTTTGTTGGTTTTCTGATCTGAGATAATGGTT 530998 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 || |||| | ||| || | |||| ||| |||||| ||||||||||| || Sbjct 530999 AAGCGGGACGGACGGAGGCATTCGTATCGCTGTGTGAGAGGTAAAATTCTTGGA-CCATA 531057 Query 252 G-AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 | |||| | | ||||||||| || | ||| |||| ||||||||||| |||||||| Sbjct 531058 GCGAGACGTCCGATTGCGAAAGCATTTGCGAAGAATGTCTTCATTAATCA-AGAACGAAA 531116 Query 311 GTTAGGGG 318 || || || Sbjct 531117 GTCAGAGG 531124 >seq392 Length=207034 Score = 89.7 bits (98), Expect = 9e-16 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||||| |||||||| | |||||||||||||||||||| | | | ||| Sbjct 106218 GCATGGAATAATGGAATAGGATCT-CGGTTCTATTTTGTTGGTTTTCTGATCTGGGATAA 106160 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 || |||| |||||| | ||| | ||| | | || |||||||||||||||||| Sbjct 106159 TGGTTAAAAGGGATGGACGGAGCATTCACGGCGCTA-CGTGAGAGGTGAAATTCTTGGAC 106101 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 | | ||| | ||| ||||||| || |||| |||| | ||||||||| ||| Sbjct 106100 TGCAGCAGGACGTCCGACT-CGAAAGCATTTGTCAAGAATGTCTACATTAATCA-AAAAC 106043 Query 307 GAAAGTTAGG 316 |||||| ||| Sbjct 106042 GAAAGTCAGG 106033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915081133824