Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq88 208 1e-51 seq145 82.4 1e-13 >seq88 Length=586650 Score = 208 bits (230), Expect = 1e-51 Identities = 197/248 (79%), Gaps = 10/248 (4%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||| ||||||||||||| |||| | |||||||||||| |||||||||||||||||| Sbjct 531602 CAGGGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCCTCACAGACCTGTTATTGCGC-- 531545 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC-CAACCATAGTCG 135 |||||| ||||| | ||| | |||||||||||||| | ||| | || || Sbjct 531544 AACTTCAGGCGGCTGAATGCCGCTTGTCCCTCTAAGAAGTCTGCCGGACTTGTTTATCCG 531485 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA-----A 190 ||| ||||||| ||| || |||||| |||||||||||| |||||||||| | Sbjct 531484 ATGA--CTATTTAATAGGCTAGAGTCTCGCGCGTTATCGGAATAAACCAGACAAGACAAA 531427 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 |||||||||||||||||| |||||||||||||||| ||| |||||||||||||||| || Sbjct 531426 TCACTCCACCAACTAAGACCGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTCTC 531367 Query 251 AATCTGTC 258 |||||||| Sbjct 531366 AATCTGTC 531359 >seq145 Length=452963 Score = 82.4 bits (90), Expect = 1e-13 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 |||||| ||| |||||||||||||||| |||||||||||||| | | || || ||| || Sbjct 337018 TTATCGAAATAAACCAGACAAATCACTTCACCAACTAAGAACTGTCGTGTTCCGCCAACC 336959 Query 229 ATAGAATCAAGAA 241 ||||| ||||||| Sbjct 336958 ATAGAGTCAAGAA 336946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796699745628