Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq88 150 3e-34 seq849 87.8 3e-15 >seq88 Length=586650 Score = 150 bits (166), Expect = 3e-34 Identities = 191/258 (74%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | |||| | ||||| |||||| ||||||||||||||||| Sbjct 531506 CTTCTTAGAGGGACAAGCGGCATTCAGCCGCCTGAAGTTGC--GCAATAACAGGTCTGTG 531563 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 | |||||||||||| | |||| ||||||||||||| ||| || | || | | | | Sbjct 531564 AGGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACCCTGGAGGAATCCGCGTGCT-GTAA 531622 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | |||| | ||| | ||||| | | ||| | ||| | || || | | |||| Sbjct 531623 CCATTGCCGAAGGGTATTGGTAACCCCTTGAAAAGCCTCGGTGATCGGAATCGGGAATTG 531682 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTA-GTAAGCGCGTGTCATCAGCACGCGTTGAT 309 ||||||| | ||| ||||| |||| |||| | ||| | | |||||||| | ||||||| Sbjct 531683 GAATTATTTCCCTTGAACGACGAATTCCTATGAAAGTGTGAATCATCAGCTCACGTTGAT 531742 Query 310 TACGTCCCTGCCCTTTGT 327 ||||||||||||||||| Sbjct 531743 GACGTCCCTGCCCTTTGT 531760 >seq849 Length=55802 Score = 87.8 bits (96), Expect = 3e-15 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 241 TAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCA 300 || || ||||||||||| | ||| |||||||||| | ||||||| | | || ||||| Sbjct 1824 TAAAGAATTGCAATTATCTCCCTTGAACGAGGAATTCATAGTAAGTGTGAGTTATCAGTT 1765 Query 301 CGCGTTGATTACGTCCCTGCCCTTTGTA 328 | |||||||||||||| ||||||||||| Sbjct 1764 CACGTTGATTACGTCCGTGCCCTTTGTA 1737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947076977664