Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascaris_20suum_20[genbank_20GCA_5F000298755.1_202012-09-20] 12,988 sequences; 269,559,681 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq9807 147 7e-33 >seq9807 Length=265 Score = 147 bits (162), Expect = 7e-33 Identities = 190/256 (74%), Gaps = 5/256 (2%) Strand=Plus/Plus Query 194 CCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGA 253 ||||||| |||||||| |||||| | |||| || | ||||||| || || |||||||| Sbjct 1 CCATCGACAGTTGATAAGGCAGACACTTGATAGACACGTCGCCGGTTCGAGACCATGCGA 60 Query 254 TTCGTTA-AGTTATTATGAATCACCAAG-GA-GCCCCGAAGGGCGTTGGTTTTTTATCTA 310 | | || ||||||| || ||||||| || | ||||| || | | |||| ||||| Sbjct 61 TCAGCTATAGTTATTCAGAGTCACCAATTGACGGGCCGAAACCCGATTGGTTTTAATCTA 120 Query 311 ATAAATACACCCCTTCCGAAGTCGGGGTTTTTA-GCATGTATTAGCTCTAGAATTACCAC 369 ||| || | | | | || |||| | ||| |||||||||||||||||||||||||| Sbjct 121 ATAGATGCGCTCGTCAGAAAATCGGAGCTTTGGTGCATGTATTAGCTCTAGAATTACCAC 180 Query 370 GGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429 |||||||| |||| | | ||||| || | ||| ||| | ||||||||| ||||| Sbjct 181 AGTTATCCACGTAGGATATCAAGATCAAGTATATAATAGCTGTTGTAATGAGCCGTTCGC 240 Query 430 AGTTTCA-CTGTATAG 444 |||||| || ||||| Sbjct 241 GGTTTCACCTTTATAG 256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510203829248