Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1699 134 6e-29 seq656 131 7e-28 seq9189 116 2e-23 seq659 116 2e-23 seq653 116 2e-23 seq8951 109 2e-21 seq2073 109 2e-21 seq9448 102 3e-19 seq1503 102 3e-19 >seq1699 Length=2309 Score = 134 bits (148), Expect = 6e-29 Identities = 110/131 (84%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC-CAG 612 ||||| || || ||||||||||||||||| ||||||| ||||| ||| |||||| ||| Sbjct 2128 AGAGCGTATATGCTGGGACCCGAAAGATGG-GAACTATACCTGAGCAGGATGAAGCACAG 2186 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 |||||||||||||| | | || |||| ||||| ||||||||||||||||| | || || Sbjct 2187 AGGAAACTCTGGTGAAAGTCCGAAGCGATTCTGACGTGCAAATCGATCGTCTGACTTTGG 2246 Query 673 TATAGGGGCGA 683 ||||||||||| Sbjct 2247 TATAGGGGCGA 2257 Score = 113 bits (124), Expect = 2e-22 Identities = 123/161 (76%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||| || |||||| | || ||| |||||| || ||||| ||||||| Sbjct 1311 GAGTCGGGTTGTTTGAGATTGCAGCCCAAAGAGGGTGGTAAACCTCATCTAAGGCTAAAT 1370 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| |||||||||||| |||||| |||| ||||| || |||| |||||| | Sbjct 1371 AC-GACCATGAGACCGATAGCAAACAAGTCCCGTGAGGGAAAGTTGCAAAGAACTTTGAA 1429 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| | ||| | |||| || Sbjct 1430 GAGAGAGTTCAAGAGGGCGTGAAACCGCTGAGATGGAAACG 1470 >seq656 Length=2908 Score = 131 bits (144), Expect = 7e-28 Identities = 95/110 (86%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || || ||||||||||||||||||||||||| ||||| ||| |||||||||| Sbjct 119 AGAGCGTATATGCTGGGACCCGAAAGATGGTGAACTATACCTGAGCAGGATGAAGCCAGA 60 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 ||||||||||||| | | || |||| ||||| ||||||||||||||||| Sbjct 59 GGAAACTCTGGTGAAAGTCCGAAGCGATTCTGACGTGCAAATCGATCGTC 10 Score = 116 bits (128), Expect = 2e-23 Identities = 124/161 (77%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||| || |||||| | || ||| |||||| || ||||| ||||||| Sbjct 934 GAGTCGGGTTGTTTGAGATTGCAGCCCAAAGAGGGTGGTAAACCTCATCTAAGGCTAAAT 875 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| |||||||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 874 AC-GACCATGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAA 816 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| | ||| | |||| || Sbjct 815 GAGAGAGTTCAAGAGGGCGTGAAACCGCTGAGATGGAAACG 775 >seq9189 Length=1005 Score = 116 bits (128), Expect = 2e-23 Identities = 124/161 (77%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||| || |||||| | || ||| |||||| || ||||| ||||||| Sbjct 396 GAGTCGGGTTGTTTGAGATTGCAGCCCAAAGAGGGTGGTAAACCTCATCTAAGGCTAAAT 337 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| |||||||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 336 AC-GACCATGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAA 278 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| | ||| | |||| || Sbjct 277 GAGAGAGTTCAAGAGGGCGTGAAACCGCTGAGATGGAAACG 237 >seq659 Length=2254 Score = 116 bits (128), Expect = 2e-23 Identities = 124/161 (77%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||| || |||||| | || ||| |||||| || ||||| ||||||| Sbjct 1987 GAGTCGGGTTGTTTGAGATTGCAGCCCAAAGAGGGTGGTAAACCTCATCTAAGGCTAAAT 2046 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| |||||||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 2047 AC-GACCATGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAA 2105 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| | ||| | |||| || Sbjct 2106 GAGAGAGTTCAAGAGGGCGTGAAACCGCTGAGATGGAAACG 2146 >seq653 Length=2347 Score = 116 bits (128), Expect = 2e-23 Identities = 124/161 (77%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||| || |||||| | || ||| |||||| || ||||| ||||||| Sbjct 2002 GAGTCGGGTTGTTTGAGATTGCAGCCCAAAGAGGGTGGTAAACCTCATCTAAGGCTAAAT 2061 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| |||||||||||| ||||||| |||| ||||| || |||| |||||| | Sbjct 2062 AC-GACCATGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAACTTTGAA 2120 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| | ||| | |||| || Sbjct 2121 GAGAGAGTTCAAGAGGGCGTGAAACCGCTGAGATGGAAACG 2161 >seq8951 Length=1021 Score = 109 bits (120), Expect = 2e-21 Identities = 123/161 (76%), Gaps = 3/161 (2%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||| || |||||| | || ||| |||||| || ||||| ||||||| Sbjct 848 GAGTCGGGTTGTTTGAGATTGCAGCCCAAAGAGGGTGGTAAACCTCATCTAAGGCTAAAT 907 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| |||||||||||| ||||||| |||| ||||| || |||| || ||| | Sbjct 908 AC-GACCATGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAAC-TTGAA 965 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| | ||| | |||| || Sbjct 966 GAGAGAGTTCAAGAGGGCGTGAAACCGCTGAGATGGAAACG 1006 >seq2073 Length=994159 Score = 109 bits (120), Expect = 2e-21 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || || ||||||| ||||||||||||||||| | ||| ||| |||||| ||| Sbjct 420151 AGAGCGTATGTGCTGGGACCAGAAAGATGGTGAACTATACTTGAGCAGGATGAAGCTAGA 420210 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||||||| || | | || |||| ||||| |||| |||||||| ||| | | | | Sbjct 420211 GGAAACTCTGTTGAATGACCGAAGCGATTCTGACGTGGAAATCGATTGTCTGACTCTGAT 420270 Query 674 ATAGGGGCGA 683 || ||||||| Sbjct 420271 ATTGGGGCGA 420280 >seq9448 Length=1297 Score = 102 bits (112), Expect = 3e-19 Identities = 106/135 (79%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||| || |||||| | || ||| |||||| || ||||| ||||||| Sbjct 137 GAGTCGGGTTGTTTGAGATTGCAGCCCAAAGAGGGTGGTAAACCTCATCTAAGGCTAAAT 78 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| |||||||||||| ||||||| |||| ||||| || |||| || ||| | Sbjct 77 AT-GACCATGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGCAAAGAAC-TTGAA 20 Query 159 AAGAGAGTTAAAAAG 173 |||||||| || || Sbjct 19 GAGAGAGTTCAAGAG 5 >seq1503 Length=71563 Score = 102 bits (112), Expect = 3e-19 Identities = 93/117 (79%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 |||||| |||||| |||||||| ||| | |||| ||||||||||||||||||||||| Sbjct 6243 TGGGACTCGAAAG----TGAACTATACCTAAGTAGGATGAAGCCAGAGGAAACTCTGGTG 6298 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || || |||| || || ||||||||||||||||| | || | ||| |||| || Sbjct 6299 AGGGTCCGAAGCGATTTTGACGTGCAAATCGATCGTCTGACTTTGATATTGGGGGGA 6355 Score = 75.2 bits (82), Expect = 5e-11 Identities = 107/147 (73%), Gaps = 3/147 (2%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 || ||| | |||||| || |||||||| || || || ||| || ||||| ||||||| Sbjct 5559 GAATCGGGCTGTTTGAGATTGCAGCTCAAAGAGGATGGCAAACCTCATCTAAGGCTAAAT 5618 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||| | ||||| ||| |||| || |||| |||||| | Sbjct 5619 AC-GACCACGAGACCGATAGTAGATAAGTACCATGAGGAAAAGTTGCAAAGAACTTTGAA 5677 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTG 185 |||||| | || || ||||||| || Sbjct 5678 GAGAGAG-TCAAGAGGGCGTGAAAATG 5703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079789125050