Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq659 223 6e-56 seq656 223 6e-56 seq653 223 6e-56 seq2073 150 3e-34 seq2055 102 1e-19 seq2059 84.2 3e-14 >seq659 Length=2254 Score = 223 bits (246), Expect = 6e-56 Identities = 200/245 (82%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| Sbjct 337 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 279 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC--ACCA-ACCATAGT 133 | |||| |||| | || | |||||||||||||| | || | | || | Sbjct 278 A-CTTCATGCGGCTAAACACCGCTTGTCCCTCTAAGAAGTTGTCTGGACGATAAAATTAT 220 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | | |||||||| ||| || |||||| ||||||||||||| |||||||||||||| Sbjct 219 CCA-GTAACTATTTAGTAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCA 161 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||| Sbjct 160 CTCCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCATGAAAGAGCTCTCAAT 101 Query 254 CTGTC 258 ||||| Sbjct 100 CTGTC 96 >seq656 Length=2908 Score = 223 bits (246), Expect = 6e-56 Identities = 200/245 (82%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| Sbjct 2572 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 2630 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC--ACCA-ACCATAGT 133 | |||| |||| | || | |||||||||||||| | || | | || | Sbjct 2631 A-CTTCATGCGGCTAAACACCGCTTGTCCCTCTAAGAAGTTGTCTGGACGATAAAATTAT 2689 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | | |||||||| ||| || |||||| ||||||||||||| |||||||||||||| Sbjct 2690 CCA-GTAACTATTTAGTAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCA 2748 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||| Sbjct 2749 CTCCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCATGAAAGAGCTCTCAAT 2808 Query 254 CTGTC 258 ||||| Sbjct 2809 CTGTC 2813 >seq653 Length=2347 Score = 223 bits (246), Expect = 6e-56 Identities = 200/245 (82%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| Sbjct 337 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 279 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC--ACCA-ACCATAGT 133 | |||| |||| | || | |||||||||||||| | || | | || | Sbjct 278 A-CTTCATGCGGCTAAACACCGCTTGTCCCTCTAAGAAGTTGTCTGGACGATAAAATTAT 220 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | | |||||||| ||| || |||||| ||||||||||||| |||||||||||||| Sbjct 219 CCA-GTAACTATTTAGTAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCA 161 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||| Sbjct 160 CTCCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCATGAAAGAGCTCTCAAT 101 Query 254 CTGTC 258 ||||| Sbjct 100 CTGTC 96 >seq2073 Length=994159 Score = 150 bits (166), Expect = 3e-34 Identities = 190/250 (76%), Gaps = 16/250 (6%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAT------T 70 ||||||||||||||||| |||| | |||||||||||||| ||||||||||||| | Sbjct 433235 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCAT-ACAGACCTGTTATCTGTTAT 433293 Query 71 GCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC--ACCA-AC 127 ||||| |||| |||| | || | |||||||||||||| | || | | Sbjct 433294 TGCTCAA-CTTCATGCGGCTAAACACCGCTTGTCCCTCTAAGAAGTTGTCTGGACGATAA 433352 Query 128 CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 || || | | |||||||| || | || |||| | |||||||||||| |||||||| Sbjct 433353 AATTATCCA-GTAACTATTTAGTAGCTAGAG-TCTCCT-CGTTATCGGAATAAACCAGAC 433409 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCA-CCACCACCCATAGAATCAAGAAAGAGC 246 |||||||||||||||| |||||| ||||||| |||||| ||| |||||| |||||||| Sbjct 433410 AAATCACTCCACCAACCTAGAACGACCATGCACCCACCAACCA-CGAATCATGAAAGAGC 433468 Query 247 TATCAATCTG 256 | ||| |||| Sbjct 433469 TCTCATTCTG 433478 >seq2055 Length=611385 Score = 102 bits (112), Expect = 1e-19 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| ||| || || | ||| ||| || | ||||||||||||||||||||| Sbjct 111317 CTATTTAGTAGGCTACAGTATTTCTCGCTATTAGATTAAACCAGACAAATCACTCCACCG 111258 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTC 261 |||||||| ||||| |||| |||| || ||||| |||||||| |||||||||| || Sbjct 111257 ACTAAGAATGGCCACGCACTACCAAACACCAAATCATTAAAGAGCTCTCAATCTGTCATC 111198 Query 262 C 262 | Sbjct 111197 C 111197 >seq2059 Length=1548761 Score = 84.2 bits (92), Expect = 3e-14 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||| ||||| |||| | |||||||||||||||||||||||||||||| |||| Sbjct 115761 CAGTGTAGCGCACGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCA 115703 Query 77 A 77 | Sbjct 115702 A 115702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796724114511