Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2744 356 4e-96 seq1938 356 4e-96 seq2717 338 1e-90 seq2740 334 1e-89 seq2073 230 4e-58 seq3638 199 7e-49 seq2420 113 8e-23 >seq2744 Length=1842 Score = 356 bits (394), Expect = 4e-96 Identities = 238/263 (90%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct 1526 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGG 1585 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 1586 TGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATC 1645 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1646 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 1705 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAA-TTTCGAGGGA---CTAAAGGATCGATAGG 270 ||||||||||||| ||||||| || ||| ||| | | | |||||||||||||| Sbjct 1706 GGTAACTTTTCTGACACCTCTTGCTAGAAACCTTCTAAAAAATTCAAAAGGATCGATAGG 1765 Query 271 CCACACTTTCATGGTTTGTATTC 293 |||| ||||| ||| ||||||| Sbjct 1766 CCACGCTTTCGCGGTCTGTATTC 1788 >seq1938 Length=36717 Score = 356 bits (394), Expect = 4e-96 Identities = 238/263 (90%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct 34822 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGG 34881 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 34882 TGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATC 34941 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34942 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 35001 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAA-TTTCGAGGGA---CTAAAGGATCGATAGG 270 ||||||||||||| ||||||| || ||| ||| | | | |||||||||||||| Sbjct 35002 GGTAACTTTTCTGACACCTCTTGCTAGAAACCTTCTAAAAAATTCAAAAGGATCGATAGG 35061 Query 271 CCACACTTTCATGGTTTGTATTC 293 |||| ||||| ||| ||||||| Sbjct 35062 CCACGCTTTCGCGGTCTGTATTC 35084 Score = 95.1 bits (104), Expect = 2e-17 Identities = 59/62 (95%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTT-CCCTATTA 93 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 36656 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCCTATTG 36715 Query 94 GT 95 || Sbjct 36716 GT 36717 >seq2717 Length=1760 Score = 338 bits (374), Expect = 1e-90 Identities = 234/263 (89%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct 1444 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGG 1503 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 1504 TGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATC 1563 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 1564 GAAGGAACAAAAAGCAACGTCGCTAGAACCGCTTGGCTGCCACAAGCCAGTTATCCCTGT 1623 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAA-TTTCGAGGGA---CTAAAGGATCGATAGG 270 ||||||||||||| ||||||| || ||| ||| | | | |||||||||||||| Sbjct 1624 GGTAACTTTTCTGACACCTCTTGCTAGAAACCTTCTAAAAAATTCAAAAGGATCGATAGG 1683 Query 271 CCACACTTTCATGGTTTGTATTC 293 |||| ||||| ||| ||||||| Sbjct 1684 CCACGCTTTCGCGGTCTGTATTC 1706 >seq2740 Length=1891 Score = 334 bits (370), Expect = 1e-89 Identities = 220/241 (91%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct 1651 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGG 1710 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 1711 TGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATC 1770 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1771 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 1830 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAA-TTTCGAGGGA---CTAAAGGATCGATAGG 270 ||||||||||||| ||||||| || ||| ||| | | | |||||||||||||| Sbjct 1831 GGTAACTTTTCTGACACCTCTTGCTAGAAACCTTCTAAAAAAATCAAAAGGATCGATAGG 1890 Query 271 C 271 | Sbjct 1891 C 1891 >seq2073 Length=994159 Score = 230 bits (254), Expect = 4e-58 Identities = 203/252 (81%), Gaps = 20/252 (8%) Strand=Plus/Minus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 ||||||||||||||||||||| ||||||||| |||| |||| || | |||| | ||||| Sbjct 43740 ACTAACCTGTCTCATGACGGTTTAAACCCAGTTCACATTCCTTACTGGTGG-TATACAAT 43682 Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAA 166 |||| ||| ||| ||||||||||||||||||||||||||||||||| Sbjct 43681 CCAA--------------TGCCTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAA 43636 Query 167 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG-GT-AACTTTT 224 ||||||||||||||||||||||||||||||||||||||| |||| |||| || |||| Sbjct 43635 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTGATCCTTGTGTGTGTGTTTTT 43576 Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGA---CTAAAGGATCGATAGGCCACACTTTCA 281 ||| ||||||| || ||| ||| | | | | |||||||||||||||||| ||||| Sbjct 43575 CTGACACCTCTTGCTAGAAACTTCTAAGAAATTCAAAAGGATCGATAGGCCACGCTTTCG 43516 Query 282 TGGTTTGTATTC 293 |||| ||||||| Sbjct 43515 TGGTCTGTATTC 43504 >seq3638 Length=1086 Score = 199 bits (220), Expect = 7e-49 Identities = 119/125 (95%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct 962 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGG 1021 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 1022 TGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATC 1081 Query 155 GAAGG 159 ||||| Sbjct 1082 GAAGG 1086 >seq2420 Length=64258 Score = 113 bits (124), Expect = 8e-23 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 167 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 226 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 2457 AGCAACGTCGCTATGAACGTTTGGCTACCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 2516 Query 227 GGCACCTCTAGC 238 | ||||||| || Sbjct 2517 GACACCTCTTGC 2528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854316003936