Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25]
9,831 sequences; 94,140,818 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq656 208 1e-51
seq659 196 9e-48
seq653 196 9e-48
seq2059 187 5e-45
seq11 95.1 2e-17
seq2073 80.6 5e-13
>seq656
Length=2908
Score = 208 bits (230), Expect = 1e-51
Identities = 204/258 (79%), Gaps = 4/258 (2%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | ||||| |||||| ||| ||||||||||||||||
Sbjct 2668 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 2611
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||| || || || | | | |
Sbjct 2610 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCAGCGTGCTG-TAA 2552
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| | ||| ||||| | ||||| | | ||| || |||| | ||||| | | ||||
Sbjct 2551 CCATTACCGAAAGGTATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 2492
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | ||| |||||||||| ||||||||| | | ||||||||| | ||||||||
Sbjct 2491 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 2432
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 2431 ACGTCCCTGCCCTTTGTA 2414
>seq659
Length=2254
Score = 196 bits (216), Expect = 9e-48
Identities = 202/258 (78%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | ||||| |||||| ||| ||||||||||||||||
Sbjct 241 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 298
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||| || | | || | | | |
Sbjct 299 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGATC-AGCGTGCTG-TAA 356
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| | || ||| | | ||||| | | ||| || |||| | ||||| | | ||||
Sbjct 357 CCATTATCGAAAGATATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 416
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | ||| |||||||||| ||||||||| | | ||||||||| | ||||||||
Sbjct 417 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 476
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 477 ACGTCCCTGCCCTTTGTA 494
>seq653
Length=2347
Score = 196 bits (216), Expect = 9e-48
Identities = 201/258 (78%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | ||||| |||||| ||| ||||||||||||||||
Sbjct 241 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 298
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||| || || || | | |
Sbjct 299 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCAGCGTGCTGT--A 356
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| | || ||| | | ||||| | | ||| || |||| | ||||| | | ||||
Sbjct 357 CCATTATCGAAAGATATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 416
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | ||| |||||||||| ||||||||| | | ||||||||| | ||||||||
Sbjct 417 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 476
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 477 ACGTCCCTGCCCTTTGTA 494
>seq2059
Length=1548761
Score = 187 bits (206), Expect = 5e-45
Identities = 199/258 (77%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | | | | ||| ||||| ||||||||||||||||
Sbjct 115666 CTTCTTAGAGGGACAAACGGTGTTTAACTGCATGAA--TTGAG-CAATAACAGGTCTGTG 115722
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||| ||||||||||| || || || | | | |
Sbjct 115723 ATGCCCTTAGATGTCCAGGGCTGCACGTGCGCTACACTGGAGGAATCAGCGTGCTG-TAA 115781
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| | ||| ||||| | ||||| | | ||| || |||| | ||||| | | ||||
Sbjct 115782 CCATTACCGAAAGGTATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 115841
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | ||| |||||||||| ||||||||| | | ||||||||| | ||||||||
Sbjct 115842 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 115901
Query 311 ACGTCCCTGCCCTTTGTA 328
|||||||| |||||||||
Sbjct 115902 ACGTCCCTTCCCTTTGTA 115919
>seq11
Length=1798
Score = 95.1 bits (104), Expect = 2e-17
Identities = 70/82 (85%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306
|||||||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||
Sbjct 1791 ATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTT 1732
Query 307 GATTACGTCCCTGCCCTTTGTA 328
||||| ||||||||||||||||
Sbjct 1731 GATTAAGTCCCTGCCCTTTGTA 1710
>seq2073
Length=994159
Score = 80.6 bits (88), Expect = 5e-13
Identities = 83/105 (79%), Gaps = 9/105 (9%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCA------ATAACAGG 124
|||||||||||||| | ||| | ||||| |||||| ||| | ||||||||
Sbjct 433337 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAGCAATAACAGATAACAGG 433279
Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169
||||| |||||||||||||| | |||| |||||||||||||||||
Sbjct 433278 TCTGT-ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTG 433235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947106880768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |