Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq656 208 1e-51 seq659 196 9e-48 seq653 196 9e-48 seq2059 187 5e-45 seq11 95.1 2e-17 seq2073 80.6 5e-13 >seq656 Length=2908 Score = 208 bits (230), Expect = 1e-51 Identities = 204/258 (79%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| |||||| ||| |||||||||||||||| Sbjct 2668 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 2611 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||| || || || | | | | Sbjct 2610 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCAGCGTGCTG-TAA 2552 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | ||| ||||| | ||||| | | ||| || |||| | ||||| | | |||| Sbjct 2551 CCATTACCGAAAGGTATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 2492 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | ||| |||||||||| ||||||||| | | ||||||||| | |||||||| Sbjct 2491 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 2432 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 2431 ACGTCCCTGCCCTTTGTA 2414 >seq659 Length=2254 Score = 196 bits (216), Expect = 9e-48 Identities = 202/258 (78%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| |||||| ||| |||||||||||||||| Sbjct 241 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 298 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||| || | | || | | | | Sbjct 299 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGATC-AGCGTGCTG-TAA 356 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | || ||| | | ||||| | | ||| || |||| | ||||| | | |||| Sbjct 357 CCATTATCGAAAGATATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 416 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | ||| |||||||||| ||||||||| | | ||||||||| | |||||||| Sbjct 417 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 476 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 477 ACGTCCCTGCCCTTTGTA 494 >seq653 Length=2347 Score = 196 bits (216), Expect = 9e-48 Identities = 201/258 (78%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| |||||| ||| |||||||||||||||| Sbjct 241 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 298 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||| || || || | | | Sbjct 299 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCAGCGTGCTGT--A 356 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | || ||| | | ||||| | | ||| || |||| | ||||| | | |||| Sbjct 357 CCATTATCGAAAGATATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 416 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | ||| |||||||||| ||||||||| | | ||||||||| | |||||||| Sbjct 417 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 476 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 477 ACGTCCCTGCCCTTTGTA 494 >seq2059 Length=1548761 Score = 187 bits (206), Expect = 5e-45 Identities = 199/258 (77%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | | | | ||| ||||| |||||||||||||||| Sbjct 115666 CTTCTTAGAGGGACAAACGGTGTTTAACTGCATGAA--TTGAG-CAATAACAGGTCTGTG 115722 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||| ||||||||||| || || || | | | | Sbjct 115723 ATGCCCTTAGATGTCCAGGGCTGCACGTGCGCTACACTGGAGGAATCAGCGTGCTG-TAA 115781 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | ||| ||||| | ||||| | | ||| || |||| | ||||| | | |||| Sbjct 115782 CCATTACCGAAAGGTATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 115841 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | ||| |||||||||| ||||||||| | | ||||||||| | |||||||| Sbjct 115842 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 115901 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||| ||||||||| Sbjct 115902 ACGTCCCTTCCCTTTGTA 115919 >seq11 Length=1798 Score = 95.1 bits (104), Expect = 2e-17 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||||||| | | | |||||||||| || |||||| ||| ||||| ||| ||||| Sbjct 1791 ATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTT 1732 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||| |||||||||||||||| Sbjct 1731 GATTAAGTCCCTGCCCTTTGTA 1710 >seq2073 Length=994159 Score = 80.6 bits (88), Expect = 5e-13 Identities = 83/105 (79%), Gaps = 9/105 (9%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCA------ATAACAGG 124 |||||||||||||| | ||| | ||||| |||||| ||| | |||||||| Sbjct 433337 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAGCAATAACAGATAACAGG 433279 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 ||||| |||||||||||||| | |||| ||||||||||||||||| Sbjct 433278 TCTGT-ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTG 433235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947106880768