Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20malayi_20[genbank_20GCA_5F000002995.4_202016-03-25] 9,831 sequences; 94,140,818 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1677 343 4e-92 seq2591 329 1e-87 seq1440 277 5e-72 seq2740 161 3e-37 seq3637 138 3e-30 seq3630 138 3e-30 seq3621 138 3e-30 seq2073 113 1e-22 >seq1677 Length=2190 Score = 343 bits (380), Expect = 4e-92 Identities = 388/512 (76%), Gaps = 21/512 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| |||||| || || | | |||| ||| | || || ||||| | |||||||||| Sbjct 43 GTACCCATTCCGATAACCGGCCTCAAA-GAGAACGGTCTCGTTATTTTTCGTCACTACCT 101 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || | | | || ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 102 CCTCATTCTGAGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTTGCCGTT 161 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||| Sbjct 162 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTACAACCATGGTA 221 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| || ||||||||||||||||||| |||||| | |||| || | ||||||| Sbjct 222 GGCACATAAACTACCATCGAAAGTTGATAAGGCAGACACTTGATAGATACGTCGCCGGTA 281 Query 241 CAAGGCCATGCGATTCGTTA-AGTTATTATGAATCACCAAGGAGCCCCGA---------- 289 |||| ||||||||| | | || |||| || ||||||| | | || Sbjct 282 CAAGACCATGCGATCAGCCATAGCTATTCAGAGTCACCAATTA--ACGGATTAAAATTAA 339 Query 290 -AGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGG-GGTTTTTAGCAT 347 | || | | |||| |||||||| || | | | || || |||| | ||| |||| Sbjct 340 TAATCCGATTGGTTTTAATCTAATAGATGCGCTCGTTTAAAATTCGGAGCTTTGGTGCAT 399 Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTAG--TAAGGTACTATCAAATAAACGA 405 ||||||||||||||||| |||| |||||||| || | ||| || ||||| || | | Sbjct 400 GTATTAGCTCTAGAATTGCCACAGTTATCCACGTTGGATAATCAAC-ATCAAGTACATTA 458 Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCA-CTGTATA-GATTGCTTATACTTAGACAT 463 || ||| | ||||||||| ||||| |||||| | |||| | || || |||||||||| Sbjct 459 TAGCTGTTATAATGAGCCGTTCGCGGTTTCACCATTATAGGTTTATTTGAACTTAGACAT 518 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGAC 495 |||||||||| ||||||||||||||||| || Sbjct 519 GCATGGCTTAGCCTTTGAGACAAGCATATAAC 550 >seq2591 Length=10997 Score = 329 bits (364), Expect = 1e-87 Identities = 385/512 (75%), Gaps = 21/512 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| |||||| || || | | |||| ||| | || || ||||| | |||||||||| Sbjct 588 GTACCCATTCCGATAACCGGCCTCAAA-GAGAACGGTCTCGTTATTTTTCGTCACTACCT 646 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || | | | || |||||||||||||| | | ||| ||||||||||||||||||||||| Sbjct 647 CCTCATTCTGAGAGTGGGTAATTTGCGCCCTTTCTGGCTTCCTTGGATGTGGTAGCCGTT 706 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||| Sbjct 707 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTTACAACCATGGTA 766 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| || ||||||||||||||||||| |||||| | |||| || | ||||||| Sbjct 767 GGCACATAAACTACCATCGAAAGTTGATAAGGCAGACACTTGATAGATACGTCGCCGGTA 826 Query 241 CAAGGCCATGCGATTCGTTA-AGTTATTATGAATCACCAAGGAGCCCCGA---------- 289 |||| ||||||||| | | || |||| || ||||||| | | || Sbjct 827 CAAGACCATGCGATCAGCCATAGCTATTCAGAGTCACCAATTA--ACGGATTAAAATTAA 884 Query 290 -AGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGG-GGTTTTTAGCAT 347 | || | | |||| |||||||| || | | | || || |||| | ||| |||| Sbjct 885 TAATCCGATTGGTTTTAATCTAATAGATGCGCTCGTTTAAAATTCGGAGCTTTGGTGCAT 944 Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTAG--TAAGGTACTATCAAATAAACGA 405 ||||||||||||||||| |||| |||||||| || | ||| || ||||| || | | Sbjct 945 GTATTAGCTCTAGAATTGCCACAGTTATCCACGTTGGATAATCAAC-ATCAAGTACATTA 1003 Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCA-CTGTATA-GATTGCTTATACTTAGACAT 463 || ||| | ||||||||| ||||| |||||| | |||| | || || |||||||||| Sbjct 1004 TAGCTGTTATAATGAGCCGTTCGCGGTTTCACCATTATAGGTTTATTTGAACTTAGACAT 1063 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGAC 495 |||||||||| ||||||||||||||||| || Sbjct 1064 GCATGGCTTAGCCTTTGAGACAAGCATATAAC 1095 >seq1440 Length=3998 Score = 277 bits (306), Expect = 5e-72 Identities = 359/488 (74%), Gaps = 31/488 (6%) Strand=Plus/Plus Query 26 AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTG 85 |||||| | || || ||||| | |||||||||||| | | || ||||| Sbjct 2095 AAAGAGAACAGTCTCGTTATTTTTCGTCACTACCTCCTCATTCTAAGAGTGGGT------ 2148 Query 86 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 145 |||| |||||||||||||||||||||||| ||||||||| |||||||||||| |||| Sbjct 2149 ---GCCT-CTGCCTTCCTTGGATGTGGTAGCCATTTCTCAGGTTCCCTCTCCGGAGTCGA 2204 Query 146 ACCCTAATTCCCCGTTACCCGTTGATACCAT-GGTAGGCCACTATCCTACCATCGAAAGT 204 ||||| |||| |||||||||||| ||||| ||||||| || |||||||||||||| Sbjct 2205 ACCCTTATTCTCCGTTACCCGTTACAACCATGGGTAGGCACATAAACTACCATCGAAAGT 2264 Query 205 TGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTA-AGT 263 ||||| |||||| | |||| || | ||||||| |||| ||||||||| | | || Sbjct 2265 TGATAAGGCAGACACTTGATAGATACGTCGCCGGTACAAGACCATGCGATCAGCCATAGC 2324 Query 264 TATTATGAATCACCAAGGAGCCCCGA-----------AGGGCGTTGGTTTTTTATCTAAT 312 |||| || ||||||| | | || | || | | |||| ||||||| Sbjct 2325 TATTCAGAGTCACCAATTA--ACGGATTAAAATTAATAATCCGATTGGTTTTAATCTAAT 2382 Query 313 AAATACACCCCTTCCGAAGTCGG-GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGG 371 | || | | | || || |||| | ||| ||||||||||||||||||||| |||| | Sbjct 2383 AGATGCGCTCGTTTAAAATTCGGAGCTTTGGTGCATGTATTAGCTCTAGAATTGCCACAG 2442 Query 372 TTATCCATGTAG--TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429 ||||||| || | ||| || ||||| || | ||| ||| | ||||||||| ||||| Sbjct 2443 TTATCCACGTTGGATAATCAAC-ATCAAGTACATTATAGCTGTTATAATGAGCCGTTCGC 2501 Query 430 AGTTTCA-CTGTATA-GATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 487 |||||| | |||| | || || |||||||||||||||||||| |||||||||||| Sbjct 2502 GGTTTCACCATTATAGGTTTATTTGAACTTAGACATGCATGGCTTAGCCTTTGAGACAAG 2561 Query 488 CATATGAC 495 ||||| || Sbjct 2562 CATATAAC 2569 >seq2740 Length=1891 Score = 161 bits (178), Expect = 3e-37 Identities = 233/322 (72%), Gaps = 20/322 (6%) Strand=Plus/Plus Query 191 CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATG 250 ||||||||||||||||||| |||||| | |||| || | ||||||| |||| ||||| Sbjct 7 CTACCATCGAAAGTTGATAAGGCAGACACTTGATAGATACGTCGCCGGTACAAGACCATG 66 Query 251 CGATTCGTTA-AGTTATTATGAATCACCAAGGAGCCCCGA-----------AGGGCGTTG 298 |||| | | || |||| || ||||||| | | || | || | Sbjct 67 CGATCAGCCATAGCTATTCAGAGTCACCAATTAACG--GATTAAAATTAATAATCCGATT 124 Query 299 GTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTA-GCATGTATTAGCTC 357 | |||| |||||||| || | | | || || |||| | ||| |||||||||||||| Sbjct 125 GGTTTTAATCTAATAGATGCGCTCGTTTAAAATTCGGAGCTTTGGTGCATGTATTAGCTC 184 Query 358 TAGAATTACCACGGTTATCCATGTAG--TAAGGTACTATCAAATAAACGATAACTGATTT 415 ||||||| |||| |||||||| || | ||| || ||||| || | ||| ||| | | Sbjct 185 TAGAATTGCCACAGTTATCCACGTTGGATAATCAAC-ATCAAGTACATTATAGCTGTTAT 243 Query 416 AATGAGCCATTCGCAGTTTCACTGT-ATAGATTGCTTATA-CTTAGACATGCATGGCTTA 473 |||||||| ||||| ||||||| | |||| || || | ||||||||||||||||||| Sbjct 244 AATGAGCCGTTCGCGGTTTCACCATTATAGGTTTATTTGAACTTAGACATGCATGGCTTA 303 Query 474 ATCTTTGAGACAAGCATATGAC 495 ||||||||||||||||| || Sbjct 304 GCCTTTGAGACAAGCATATAAC 325 >seq3637 Length=1247 Score = 138 bits (152), Expect = 3e-30 Identities = 158/205 (77%), Gaps = 7/205 (3%) Strand=Plus/Plus Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTA-GCATGTATTAG 354 |||||||| |||||||| || | | | || || |||| | ||| ||||||||||| Sbjct 25 TTGGTTTTA-ATCTAATAGATGCGCTCGTTTAAAATTCGGAGCTTTGGTGCATGTATTAG 83 Query 355 CTCTAGAATTACCACGGTTATCCATGTAG--TAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||| |||| |||||||| || | ||| || ||||| || | ||| ||| Sbjct 84 CTCTAGAATTGCCACAGTTATCCACGTTGGATAATCAAC-ATCAAGTACATTATAGCTGT 142 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGT-ATAGATTGCTTATA-CTTAGACATGCATGGC 470 | ||||||||| ||||| ||||||| | |||| || || | |||||||||||||||| Sbjct 143 TATAATGAGCCGTTCGCGGTTTCACCATTATAGGTTTATTTGAACTTAGACATGCATGGC 202 Query 471 TTAATCTTTGAGACAAGCATATGAC 495 ||| ||||||||||||||||| || Sbjct 203 TTAGCCTTTGAGACAAGCATATAAC 227 >seq3630 Length=1002 Score = 138 bits (152), Expect = 3e-30 Identities = 158/205 (77%), Gaps = 7/205 (3%) Strand=Plus/Plus Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTA-GCATGTATTAG 354 |||||||| |||||||| || | | | || || |||| | ||| ||||||||||| Sbjct 66 TTGGTTTTA-ATCTAATAGATGCGCTCGTTTAAAATTCGGAGCTTTGGTGCATGTATTAG 124 Query 355 CTCTAGAATTACCACGGTTATCCATGTAG--TAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||| |||| |||||||| || | ||| || ||||| || | ||| ||| Sbjct 125 CTCTAGAATTGCCACAGTTATCCACGTTGGATAATCAAC-ATCAAGTACATTATAGCTGT 183 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGT-ATAGATTGCTTATA-CTTAGACATGCATGGC 470 | ||||||||| ||||| ||||||| | |||| || || | |||||||||||||||| Sbjct 184 TATAATGAGCCGTTCGCGGTTTCACCATTATAGGTTTATTTGAACTTAGACATGCATGGC 243 Query 471 TTAATCTTTGAGACAAGCATATGAC 495 ||| ||||||||||||||||| || Sbjct 244 TTAGCCTTTGAGACAAGCATATAAC 268 >seq3621 Length=1043 Score = 138 bits (152), Expect = 3e-30 Identities = 158/205 (77%), Gaps = 7/205 (3%) Strand=Plus/Plus Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTA-GCATGTATTAG 354 |||||||| |||||||| || | | | || || |||| | ||| ||||||||||| Sbjct 63 TTGGTTTTA-ATCTAATAGATGCGCTCGTTTAAAATTCGGAGCTTTGGTGCATGTATTAG 121 Query 355 CTCTAGAATTACCACGGTTATCCATGTAG--TAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||| |||| |||||||| || | ||| || ||||| || | ||| ||| Sbjct 122 CTCTAGAATTGCCACAGTTATCCACGTTGGATAATCAAC-ATCAAGTACATTATAGCTGT 180 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGT-ATAGATTGCTTATA-CTTAGACATGCATGGC 470 | ||||||||| ||||| ||||||| | |||| || || | |||||||||||||||| Sbjct 181 TATAATGAGCCGTTCGCGGTTTCACCATTATAGGTTTATTTGAACTTAGACATGCATGGC 240 Query 471 TTAATCTTTGAGACAAGCATATGAC 495 ||| ||||||||||||||||| || Sbjct 241 TTAGCCTTTGAGACAAGCATATAAC 265 >seq2073 Length=994159 Score = 113 bits (124), Expect = 1e-22 Identities = 79/90 (88%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 94 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153 ||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| || Sbjct 434192 CTGCCTTACTTGGATGTGGTAGCCGTTTCTCAGGCTCTCTCTTCGGAATCGAACCCTTAT 434251 Query 154 TCCCCGTTACCCGTTGATACCATGGTAGGC 183 || ||| ||||||| |||| ||||||| Sbjct 434252 TCTCCGCAACCCGTTACAACCACGGTAGGC 434281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510251512576