Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1531 75.2 2e-11 >seq1531 Length=19969 Score = 75.2 bits (82), Expect = 2e-11 Identities = 127/176 (72%), Gaps = 6/176 (3%) Strand=Plus/Minus Query 141 AATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGAT 200 ||||||| | || ||||||||||||||||| | ||| |||| |||| ||| | Sbjct 5487 AATAGGATCT-CGATTCTATTTTGTTGGTTTTCTGATCCGAGAAAATGGTTAAGAGGAAC 5429 Query 201 AGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT-TATTGAAGACTA 259 || ||| | || |||| || |||| ||||||||||||| || || ||| Sbjct 5428 AGACGGACAT-TC-GTATCGCTGCGTAAGAGCTGAAATTCTTGGACCGTAGCGA-GACGT 5372 Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 || ||||||||||| || ||||| |||| ||||||||||| | |||||||| || Sbjct 5371 ACGACTGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCA-AGGACGAAAGTCAG 5317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915055078080