Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1706 185 2e-44 >seq1706 Length=172711 Score = 185 bits (204), Expect = 2e-44 Identities = 148/173 (86%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 249 GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTC 308 ||||| |||| ||||| ||| || |||||| ||||||||||||||||| ||||||||| Sbjct 161759 GCTCCAACTGTTTGTAAGCACTCGATTTCAGATTCTATTTCACTCCCCTC-CCGGGGTTC 161701 Query 309 TTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCA-GTAGTATTTAGCCTT 367 ||||| |||||||||||||||||| |||||||||||||| |||| | ||||||||| ||| Sbjct 161700 TTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTC-GTCAAGGAGTATTTAGGCTT 161642 Query 368 GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||||| | ||||||| |||| |||| |||| ||||| ||| ||||||| Sbjct 161641 GGAGGATGAT-CCCCCATGTTCAAACAAGATTTCACGTGCCCCGCTCTACTCG 161590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241403392640