Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4854 192 1e-46 seq1356 172 1e-40 seq1531 96.9 7e-18 >seq4854 Length=906333 Score = 192 bits (212), Expect = 1e-46 Identities = 176/220 (80%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||| |||||||||||||||||||||||||||||| | |||| |||||||||||||||| Sbjct 141621 TTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACT 141679 Query 169 GACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG 228 | || || || | | | ||| | ||| ||||| | ||||| | | ||| || Sbjct 141680 GGAGGAATCAGCGTGCTG-TAACCATTACCGAAAGGTATTGGTAACCCCTTGAAAATCCT 141738 Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 |||| | ||||| | | |||||||||||| | ||| |||||||||| ||||||||| | Sbjct 141739 CCGTGATCGGGATCGGGAATTGCAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGT 141798 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||||||| | |||||||||||||||||||||||||| Sbjct 141799 GAGTCATCAGCTCACGTTGATTACGTCCCTGCCCTTTGTA 141838 >seq1356 Length=33441 Score = 172 bits (190), Expect = 1e-40 Identities = 190/248 (77%), Gaps = 10/248 (4%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| |||||| ||| |||||||||||||||| Sbjct 4067 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 4010 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCC---AACGAGTTCA 187 |||||||||||||| | |||| ||||||||||||||||| || | || ||| Sbjct 4009 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCCCTAAACAGTA-- 3952 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 ||| | ||| ||||| | ||||| | | ||| || |||| | ||||| | | | Sbjct 3951 --ACCATTACCGAAAGGTATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAA 3894 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 ||||||||||| | ||| |||||||||| ||||||||| | | ||||||||| | ||||| Sbjct 3893 TTGCAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTG 3834 Query 308 ATTACGTC 315 |||||||| Sbjct 3833 ATTACGTC 3826 >seq1531 Length=19969 Score = 96.9 bits (106), Expect = 7e-18 Identities = 83/99 (84%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||| | |||||| ||| |||||||||||||||| Sbjct 4975 CTTCTTAGAGGGACAAGCGGAGTTTAGCAGCATGAAGTT-GAG-CAATAACAGGTCTGTG 4918 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 ||||||||||||| | |||| ||||||||||||||||| Sbjct 4917 ATGCCCTTAGATGACCAGGGCTGCACGCGCGCTACACTG 4879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947050010880