Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20pahangi_20[genbank_20GCA_5F001280985.1_202015-09-10] 15,835 sequences; 83,528,896 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1444 271 2e-70 seq1531 118 3e-24 >seq1444 Length=56687 Score = 271 bits (300), Expect = 2e-70 Identities = 321/425 (76%), Gaps = 21/425 (5%) Strand=Plus/Plus Query 89 GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148 ||||||||| |||||||||||||||||| |||||||||| |||||||||||| | ||||| Sbjct 10443 GCCTGCTGCTTTCCTTGGATGTGGTAGCGGTTTCTCAGGTTCCCTCTCCGGAGTTGAACC 10502 Query 149 CTAATTCCCCGTTACCCGTTGATACCAT-GGTAGGCCACTATCCTACCATCGAAAGTTGA 207 || |||| |||||||||||| ||||| ||||||| || ||||||||||||||||| Sbjct 10503 CTTATTCTCCGTTACCCGTTACAACCATGGGTAGGCACATAAACTACCATCGAAAGTTGA 10562 Query 208 TAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTA-AGTTAT 266 || |||||| | |||| || | ||||||| |||| ||||||||| | | || ||| Sbjct 10563 TAAGGCAGACACTTGATAGATACGTCGCCGGTACAAGACCATGCGATCAGCCATAGCTAT 10622 Query 267 TATGAATCACCAAGGAGCCCCGA-----------AGGGCGTTGGTTTTTTATCTAATAAA 315 | || ||||||| | | || | || | | |||| |||||||| | Sbjct 10623 TCAGAGTCACCAATTA--ACGGATTAAAATTAATAATCCGATTGGTTTTAATCTAATAGA 10680 Query 316 TACACCCCTTCCGAAGTCGG-GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTA 374 | | | | || || |||| | ||| ||||||||||||||||||||| |||| |||| Sbjct 10681 TGCGCTCGTTTAAAATTCGGAGCTTTGGTGCATGTATTAGCTCTAGAATTGCCACAGTTA 10740 Query 375 TCCATG-TAG-TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGT 432 |||| | ||| ||| || ||||| || | ||| ||| | ||||||||| ||||| || Sbjct 10741 TCCACGTTAGATAATCAAC-ATCAAGTACATTATAGCTGTTATAATGAGCCGTTCGCGGT 10799 Query 433 TTCA-CTGTATA-GATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCAT 490 |||| | |||| | || || |||||||||||||||||||| ||||||||||||||| Sbjct 10800 TTCACCATTATAGGTTTATTTGAACTTAGACATGCATGGCTTAGCCTTTGAGACAAGCAT 10859 Query 491 ATGAC 495 || || Sbjct 10860 ATAAC 10864 >seq1531 Length=19969 Score = 118 bits (130), Expect = 3e-24 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 94 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153 |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| || Sbjct 5859 CTGCCTTCCTTGAATGTGGTAGCCGTTTCTCAGGCTCCTTCTCCGGAATCGAAACCTTAT 5918 Query 154 TCCCCGTTACCCGTTGATACCATGGTAGGC 183 || || |||||||| |||||||||||| Sbjct 5919 TCTCCACTACCCGTTACAACCATGGTAGGC 5948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510160828160