Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq12715 132 5e-29 seq7506 118 1e-24 >seq12715 Length=1303 Score = 132 bits (146), Expect = 5e-29 Identities = 148/194 (76%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 2 TACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAG 61 || |||||||||||| |||||| ||||||||||| |||| ||||||| | || ||| Sbjct 364 TAACTGAAGCTTAGAGACTTTTCCTGGAAGCATGGTATCAGCCACTTCAC--TGTACAAG 307 Query 62 -ATAACTCGTCATCAGCTCCCGGCCTT-AGAATCCCGGATTTACCTAAGATTCCAGCCTA 119 | | || | ||| ||| | || | || | ||||||||| |||||||| | ||||| Sbjct 306 TACAGCTTGCTATCGACTCTCAGCATAGAGCACCCCGGATTTGCCTAAGATGCATGCCTA 247 Query 120 CCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGC 179 | ||| || |||||||||||||||| |||| | || |||||||||||| |||||| Sbjct 246 CGGTCTTCCACCTGGACAACCAACGCCAGGCTGACTTAACCTTCTCCGTCCTCTCATCGC 187 Query 180 ATTAACCAGAAGTA 193 |||| |||||||| Sbjct 186 ATTACACAGAAGTA 173 >seq7506 Length=2542 Score = 118 bits (130), Expect = 1e-24 Identities = 135/178 (76%), Gaps = 9/178 (5%) Strand=Plus/Minus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 ||||||||||| |||||||| ||||||| ||| |||| |||||| | | |||| Sbjct 1575 CTGAAGCTTAGGAGCTTTTCCTGGAAGCGTGGTATCAGTGACTTCGCCTT---AAAGG-- 1521 Query 65 ACTCGTCATCAGCTCCCGGCCTTAGA--ATCCCGGATTTACCTAAGATTCCAGCCTACCA 122 |||||| || | | ||| |||| | ||||||||||| || ||||| | | |||||| Sbjct 1520 -CTCGTC-TCGGTGCTCGGTCTTAAAGGATCCCGGATTTGCCAAAGATCCAAACCTACCG 1463 Query 123 CCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 |||| | |||||||||||||| | |||| |||||||||||||||||||||| Sbjct 1462 CCTTTCCCCAGGACAACCAACGCCTGGTACACCTAACCTTCTCCGTCCCTCCATCGCA 1405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518279657814