Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq13289 553 4e-155 seq7472 446 4e-123 seq18386 417 2e-114 seq13397 179 1e-42 seq14599 138 3e-30 seq15497 123 6e-26 >seq13289 Length=1227 Score = 553 bits (612), Expect = 4e-155 Identities = 357/391 (91%), Gaps = 0/391 (0%) Strand=Plus/Minus Query 19 ACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAAT 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 621 ACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAAT 562 Query 79 TACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTA 138 ||||||||||||||||||||||||||||| |||||| | | |||||||||||||||| | Sbjct 561 TACTGGGCGTAAAGCGTGCGCAGGCGGTTTTGTAAGTCTGTCGTGAAATCCCCGGGCTCA 502 Query 139 ACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCA 198 ||||||||||||| | | ||||||| | ||||| | || ||||||||||| |||||||| Sbjct 501 ACCTGGGAATTGCGATGGAGACTGCAAGGCTAGAATCTGGCAGAGGGGGGTAGAATTCCA 442 Query 199 CGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTG 258 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 441 CGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAACACCGATGGCGAAGGCAGCCCCCTG 382 Query 259 GGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 318 || || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 381 GGTCAAGATTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 322 Query 319 AGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTGGTAACGTAGC 378 ||||||||||||||||||| || ||||||||| ||| || | | |||||||||| ||| Sbjct 321 AGTCCACGCCCTAAACGATGTCTACTAGTTGTCGGGTTTTAATTAACTTGGTAACGCAGC 262 Query 379 TAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 ||||||||||||| ||||||||||||| ||| Sbjct 261 TAACGCGTGAAGTAGACCGCCTGGGGAGTAC 231 Score = 187 bits (206), Expect = 6e-45 Identities = 103/103 (100%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 725 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 666 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG 105 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 665 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG 623 >seq7472 Length=2552 Score = 446 bits (494), Expect = 4e-123 Identities = 345/409 (84%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 993 TACCCAAAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGC 934 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| ||||||||||||||||||||||||||| ||| ||| || |||| | | ||| Sbjct 933 AAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGTAGGTGGTCGTTTAAGTCCGTTGT 874 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||| ||| ||||| |||||||||| |||| | | |||| |||||||||||||| ||| Sbjct 873 GAAAGCCCTGGGCTCAACCTGGGAACTGCAGTGGATACTGGACGACTAGAGTGTGGTAGA 814 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 ||| | |||||||| |||||||||||||||||||||| || ||||||||| | |||| Sbjct 813 GGGTAGCGGAATTCCTGGTGTAGCAGTGAAATGCGTAGAGATCAGGAGGAACATCCATGG 754 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||||||||| ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct 753 CGAAGGCAGCTACCTGGACCAACACTGACACTGAGGCACGAAAGCGTGGGGAGCAAACAG 694 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGG--GGATTTA 360 ||||||||||||||||||||||||||||||||||| |||| | |||||| | | || Sbjct 693 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAACTGGATGTTGGGTGCAATTT 634 Query 361 CTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | ||| || ||||||||||| ||||| ||||||||||| ||| Sbjct 633 GGCACGCAGTATCGAAGCTAACGCGTTAAGTTCGCCGCCTGGGGAGTAC 585 >seq18386 Length=716 Score = 417 bits (462), Expect = 2e-114 Identities = 334/401 (83%), Gaps = 1/401 (0%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||| Sbjct 509 AGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTT 450 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||||| ||||||||||||||||||||| |||||| | | |||| | | |||||||||| Sbjct 449 AATCGGATTTACTGGGCGTAAAGCGTGCGTAGGCGGCTTTTTAAGTCGGATGTGAAATCC 390 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 ||| ||||||| ||||||||||||| | |||| ||||||| || ||||| ||| Sbjct 389 CCGAGCTTAACTTGGGAATTGCATTCGATACTGGGAAGCTAGAGTATGGGAGAGGATGGT 330 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| ||||||| |||||||||||||| || |||||||| ||| ||||||||||| Sbjct 329 AGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGATGGCGAAGGC 270 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 |||| |||| ||| |||||| || | | ||||||| ||||||||||||||||||||| Sbjct 269 AGCCATCTGGCCTAATACTGACACTGAGGTGCGAAAGCATGGGGAGCAAACAGGATTAGA 210 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGG-ATTTACTTCCTTG 368 ||||||||||||||| ||| |||||||| || ||||| ||||||| ||| | || Sbjct 209 TACCCTGGTAGTCCATGCCGTAAACGATGTCTACTAGCCGTTGGGGCCTTTGAGGCTTTA 150 Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || |||||||||| |||| ||||||||||||| ||| Sbjct 149 GTGGCGCAGCTAACGCGATAAGTAGACCGCCTGGGGAGTAC 109 >seq13397 Length=1212 Score = 179 bits (198), Expect = 1e-42 Identities = 102/104 (98%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1109 TACCGTAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 1168 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT 106 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1169 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT 1212 >seq14599 Length=1052 Score = 138 bits (152), Expect = 3e-30 Identities = 162/216 (75%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 213 TACCTTTCGAATAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGCGC 154 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||||| ||||||||||| | | |||||||| | | ||||| Sbjct 153 AAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTTGTAGGCGGTTCGTCGCGTCTGGTGT 94 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG- 181 |||| ||| ||||||| || |||| | || | | |||||||| ||| Sbjct 93 GAAAGCCCATCGCTTAACGGTGGGTTTGCGCCGGGTACGGGCGGGCTAGAGTG---CAGT 37 Query 182 AGGGGGG--TGGAATTCCACGTGTAGCAGTGAAATG 215 ||||| | |||||||| ||||| | ||| |||| Sbjct 36 AGGGGAGACTGGAATTCTCGGTGTAACGGTGGAATG 1 >seq15497 Length=938 Score = 123 bits (136), Expect = 6e-26 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 180 AGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAA 239 || || | |||||||| | ||| || | |||| | |||||| | |||||| |||| Sbjct 1 AGGGGAGAGTGGAATTTCGTGTGGAGGGATCAAATCCTAAGATATACGAAGGAACGCCAA 60 Query 240 TGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAA 299 ||||||||||| | ||||| |||||||||| | ||||||| ||||||||||| Sbjct 61 CCGCGAAGGCAGCTCTCTGGGTCCCCACTGACGCTGGGGTGCGAAAGCATGGGGAGCAAA 120 Query 300 CAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||| |||||||||||||||||| ||| ||| |||| Sbjct 121 CAGGATCAGATACCCTGGTAGTCCATGCCGTAAGCGAT 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289290973152