Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq12715 185 8e-45 seq7506 179 4e-43 seq9987 149 6e-34 seq21111 100 3e-19 seq11634 77.0 3e-12 >seq12715 Length=1303 Score = 185 bits (204), Expect = 8e-45 Identities = 123/137 (90%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 22 GGGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTA 81 |||||||||||| | ||| || | | || ||| ||||||||||||| ||||||||||| Sbjct 496 GGGACTTGCTCCCTGAGCGGTTGGCAGCCGCAGAAACCAGGCCGCTGCAACTGTTTATTA 555 Query 82 AAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGC 141 |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 556 AAAACATAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGATGCCTGCCCGGTGC 615 Query 142 CGGAAGGTTAATTGATG 158 |||||||||||||||| Sbjct 616 TGGAAGGTTAATTGATG 632 >seq7506 Length=2542 Score = 179 bits (198), Expect = 4e-43 Identities = 107/112 (96%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1732 GGTCGCAGTAACCAGGCCGCTGCGACTGTTTATCAAAAACACAGCACTCTGCAAACACGA 1791 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1792 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCTGGAAGGTTAATTGATG 1843 >seq9987 Length=1829 Score = 149 bits (164), Expect = 6e-34 Identities = 88/92 (96%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 580 GCTGCGACTGTTTAATAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 639 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGA 156 ||||||||||||||||| ||||| |||| ||| Sbjct 640 TGACGCCTGCCCGGTGCTGGAAGATTAAATGA 671 >seq21111 Length=591 Score = 100 bits (110), Expect = 3e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| || ||||||||| ||||||||||| |||||| || || ||| || ||||| Sbjct 423 AGGCCCAAGCAACTGTTTATCAAAAACACAGCTCTCTGCTAAATCGTAAGATGATGTATA 482 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| |||||||||||||||||| |||||||||| Sbjct 483 GGGGGTGACGCCTGCCCGGTGCTGGAAGGTTAA 515 >seq11634 Length=1480 Score = 77.0 bits (84), Expect = 3e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||||||| | ||| || || ||| | ||||| | | ||| Sbjct 1450 GCGACTGTTTACCAAAAACACAGGAGCGTGCGAAGGCGTAAGCCGCTGTATACGCTCTGA 1391 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||||||||||||||||||| Sbjct 1390 CGCCTGCCCGGTGCCGGAAGGTTAA 1366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476689314903