Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq12715 461 2e-127 seq7506 432 9e-119 seq9987 324 3e-86 seq11634 206 7e-51 seq21601 188 2e-45 seq21111 179 9e-43 >seq12715 Length=1303 Score = 461 bits (510), Expect = 2e-127 Identities = 311/347 (90%), Gaps = 1/347 (0%) Strand=Plus/Minus Query 81 CGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACG 140 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 740 CGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACG 681 Query 141 GCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAATTAACC 200 |||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 680 GCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTACGCTAACCCCATCAATTAACC 621 Query 201 TTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGT 260 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct 620 TTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTAT 561 Query 261 GTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAA 320 |||||||||||||||| ||||||||||||| ||| || | | || ||| | ||||||| Sbjct 560 GTTTTTAATAAACAGTTGCAGCGGCCTGGTTTCTGCGGCTGCCAACCGCTCAGGGAGCAA 501 Query 321 GT-CCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTC 379 || || ||||| ||| | ||| ||||||||||||||||||||| || ||||||||||||| Sbjct 500 GTCCCATCACCGTCAGCAGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGCCTAGTTC 441 Query 380 CTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||| | |||||||||||||||| ||||| | ||| ||| ||||| Sbjct 440 CTTCAGCAGAGTTCTCTCAAGCGCTTTGGTCTACTCGACCTGACCAC 394 Score = 239 bits (264), Expect = 1e-60 Identities = 145/154 (94%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||||||||||||||||||||||| ||||||||||| ||| | |||||||||| Sbjct 892 CGCGGGTACACTGCATCTTCACAGCGATTTCGATTTCACTGAGCCTCTGCTGGAGACAGC 833 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 832 GCCGCCATCATTATGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 773 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCG 154 ||||||||||||| ||||||||||||||||| || Sbjct 772 TTAGGACCGTTATAGTTACGGCCGCCGTTTANCG 739 >seq7506 Length=2542 Score = 432 bits (478), Expect = 9e-119 Identities = 307/349 (88%), Gaps = 5/349 (1%) Strand=Plus/Minus Query 81 CGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACG 140 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1953 CGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACG 1894 Query 141 GCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA--GCTAACCCCATCAATTAA 198 |||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||| Sbjct 1893 GCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCCTTGCGGCTGACCCCATCAATTAA 1834 Query 199 CCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCT 258 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1833 CCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCT 1774 Query 259 GTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCT-TACGGAG 317 |||||||| ||||||||||||||||||||||| || ||||| | | |||| || | Sbjct 1773 GTGTTTTTGATAAACAGTCGCAGCGGCCTGGTTACTGCGACCCTCTTCAGCTATAGCTCG 1714 Query 318 CAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGT 377 || | | |||| | || |||||||||||||||||||||||||| | ||||||||| Sbjct 1713 CACGAGC--CACCAAAAAGGGTGCACCTTCTCCCGAAGTTACGGTGCCATGTTGCCTAGT 1656 Query 378 TCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||||| ||||||||||||||||||||| | |||||| || | |||| Sbjct 1655 TCCTTCACCCGAGTTCTCTCAAGCGCCTGAGAATTCTCATCCTACCCAC 1607 Score = 244 bits (270), Expect = 3e-62 Identities = 143/148 (97%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 8 ACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCA 67 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2102 ACGCTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCTG 2043 Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2042 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 1983 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGG 155 |||||| |||||||||||||||||| || Sbjct 1982 CGTTATAGTTACGGCCGCCGTTTACTGG 1955 >seq9987 Length=1829 Score = 324 bits (358), Expect = 3e-86 Identities = 319/419 (76%), Gaps = 8/419 (2%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || | |||||| ||||| ||||||| ||| |||||||||||| |||||||| Sbjct 860 CGCGGGTAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCTCGGGAGGAGACAGT 801 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 800 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 741 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| ||||||||||||| Sbjct 740 TTAGGACCGTTATAGTTACGGCCGCCG-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 682 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||| |||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 681 NNNNNNNNNNTCATTTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 622 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCC-TGGTATCTTCGAC 299 ||||||||||||||||||||||||||| |||||||||||||| || | ||| | | || Sbjct 621 TCGTGTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCATTTTAT-TGCAAC 563 Query 300 CGG--CATGAGCTTACGGAG-CAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGT 356 | | ||| ||| | || |||| | | | | |||| ||||| ||||||||| Sbjct 562 CCGTTCAT--CCTTCCACAGTAAAGTGGTCAAACTACTAGGGCGTACCTTATCCCGAAGT 505 Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 |||||| || |||||| ||||||||| |||||||||||||||||||||| | || ||| Sbjct 504 TACGGTACCAATTTGCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTC 446 >seq11634 Length=1480 Score = 206 bits (228), Expect = 7e-51 Identities = 173/212 (82%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1239 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 1298 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACC 187 ||||| ||||| ||||||||||||||||||| || | ||||| | ||||||| Sbjct 1299 GGTTATAGTTACCACCGCCGTTTACCGGGGCTTAAATTCACCGCTTCACCGAAGCTAACG 1358 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 | |||||||||||||||||||||||||||| | | ||||| | ||| || || Sbjct 1359 GATCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGAGCGTATACAGCGGCTTACGCCTT 1418 Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||| | |||||||||| ||||||||||| Sbjct 1419 CGCACGCTCCTGTGTTTTTGGTAAACAGTCGC 1450 >seq21601 Length=573 Score = 188 bits (208), Expect = 2e-45 Identities = 128/144 (89%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| | | |||||| ||||| ||||||| ||| ||||||||| || |||||||| Sbjct 144 CGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCTCAGGAGGAGACAGT 85 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 84 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 25 Query 121 TTAGGACCGTTATTGTTACGGCCG 144 ||||||||||||| |||||||||| Sbjct 24 TTAGGACCGTTATAGTTACGGCCG 1 >seq21111 Length=591 Score = 179 bits (198), Expect = 9e-43 Identities = 206/279 (74%), Gaps = 25/279 (9%) Strand=Plus/Minus Query 119 CCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGT 178 ||||||||||||||| |||||||||||||||||| |||||||| || | |||||| | Sbjct 591 CCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCATGCCTTCGCTT 532 Query 179 TAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 ||||| | | | |||||||||| |||||||||||||||||| |||||||| || | Sbjct 531 ACGCTAAGCACTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCACCCCCTATACATCATC 472 Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298 || || || |||||| ||||||||||| ||||||||| || ||||| | || || Sbjct 471 TTACGATTTAGCAGAGAGCTGTGTTTTTGATAAACAGTTGCTTGGGCCTATTCACTGCG- 413 Query 299 CCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTA 358 ||| || || || ||| |||| |||||||||||||||| Sbjct 412 ---------GCT----GACCA--TCAGTCA---------GCGCCCCTTCTCCCGAAGTTA 377 Query 359 CGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTC 397 ||| ||| ||||||| |||||||| | |||||||||| Sbjct 376 CGGGGCCATTTTGCCGAGTTCCTTAACGAGAGTTCTCTC 338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260497874496