Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq21111 291 2e-76 seq11634 259 1e-66 seq7506 210 5e-52 seq12715 206 6e-51 seq9987 149 1e-33 seq21601 143 6e-32 >seq21111 Length=591 Score = 291 bits (322), Expect = 2e-76 Identities = 218/253 (86%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 113 CCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATT 172 |||||||||||||||||||||||||||||||||||||||||| | |||| ||||| || Sbjct 591 CCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCATGCCTTCGCTT 532 Query 173 GCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTC 232 | |||| ||| ||||||||||||||||||||||||||||| | |||||||||| || Sbjct 531 ACGCTAAGCACTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCACCCCCTATACATCATC 472 Query 233 TTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGG 292 || ||| |||||||| | ||||||||||| |||||||| |||||||||||||| |||||| Sbjct 471 TTACGATTTAGCAGAGAGCTGTGTTTTTGATAAACAGTTGCTTGGGCCTATTCACTGCGG 412 Query 293 CCTGTCAT-AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 | ||| || || || ||||||||||| ||||||||||| |||||||||||||||||| Sbjct 411 CTGACCATCAGTCA-GCGCCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAGTTCCTT 353 Query 352 AACAATAGTTCTC 364 ||| | ||||||| Sbjct 352 AACGAGAGTTCTC 340 >seq11634 Length=1480 Score = 259 bits (286), Expect = 1e-66 Identities = 218/268 (81%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | ||||||| ||| | | | ||||||||| || ||||| Sbjct 1184 GCATCTTTACTCGTACTGCAATTTCGCCGGGCTCCTGGCCGAGACAGTGGGGAAGTCGTT 1243 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1244 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 1303 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||| ||||||||||| ||||||||| ||||| ||||| ||||| ||||| Sbjct 1304 TAGTTACCACCGCCGTTTACCGGGGCTTAAATTCACCGCTTCACCGAAGCTAACGGATCC 1363 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 ||||||||||| |||||||||||||||||| | |||||| || ||| || ||| ||| Sbjct 1364 TCTTAACCTTCCGGCACCGGGCAGGCGTCAGAGCGTATACAGCGGCTTACGCCTTCGCAC 1423 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCT 274 ||||||||||||||||||||||||| Sbjct 1424 GCTCCTGTGTTTTTGGTAAACAGTCGCT 1451 >seq7506 Length=2542 Score = 210 bits (232), Expect = 5e-52 Identities = 237/316 (75%), Gaps = 26/316 (8%) Strand=Plus/Minus Query 75 CGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACG 134 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1953 CGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACG 1894 Query 135 GCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-ATTGC-TCTAACAGATCCCCTTAA 192 |||||||||||||||||||| | | |||||| |||| || || | |||| Sbjct 1893 GCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCCTTGCGGCTGACCCCATCAATTAA 1834 Query 193 CCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCT 252 |||||||||||||||||||||||| ||||||| || ||| || || ||||| || Sbjct 1833 CCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCT 1774 Query 253 GTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC------CTGTCATAG---- 302 ||||||||| ||||||||||| ||||| | ||||| | | | |||| Sbjct 1773 GTGTTTTTGATAAACAGTCGCAGCGGCCTGGTTACTGCGACCCTCTTCAGCTATAGCTCG 1714 Query 303 -AC-AGGCACC------------CCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348 || || |||| ||||||||| ||||||||| | ||| ||||| ||||| Sbjct 1713 CACGAGCCACCAAAAAGGGTGCACCTTCTCCCGAAGTTACGGTGCCATGTTGCCTAGTTC 1654 Query 349 CTTAACAATAGTTCTC 364 ||| || ||||||| Sbjct 1653 CTTCACCCGAGTTCTC 1638 Score = 190 bits (210), Expect = 4e-46 Identities = 128/143 (90%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | |||| ||||||||| |||||| || ||||||| ||| ||||| Sbjct 2097 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCTGTCGTT 2038 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2037 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 1978 Query 127 TAGTTACGGCCGCCGTTTACTGG 149 ||||||||||||||||||||||| Sbjct 1977 TAGTTACGGCCGCCGTTTACTGG 1955 >seq12715 Length=1303 Score = 206 bits (228), Expect = 6e-51 Identities = 177/219 (81%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 75 CGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACG 134 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 740 CGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACG 681 Query 135 GCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCCTTAACC 194 |||||||||||||||||||| | | |||||| || | ||||| | |||||| Sbjct 680 GCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTACGCTAACCCCATCAATTAACC 621 Query 195 TTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGT 254 |||||||||||||||||| ||| ||||||| || ||| || || ||||| || | Sbjct 620 TTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTAT 561 Query 255 GTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC 293 |||||| |||||||| || ||||| | |||||||| Sbjct 560 GTTTTTAATAAACAGTTGCAGCGGCCTGGTTTCTGCGGC 522 Score = 172 bits (190), Expect = 1e-40 Identities = 125/145 (86%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | |||| | ||||||| ||| || | | ||||||| ||| Sbjct 886 TACACTGCATCTTCACAGCGATTTCGATTTCACTGAGCCTCTGCTGGAGACAGCGCCGCC 827 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||| ||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 826 ATCATTATGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 767 Query 121 CCGTTATAGTTACGGCCGCCGTTTA 145 ||||||||||||||||||||||||| Sbjct 766 CCGTTATAGTTACGGCCGCCGTTTA 742 >seq9987 Length=1829 Score = 149 bits (164), Expect = 1e-33 Identities = 114/135 (84%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||| |||| ||| ||| ||| | |||||| | ||||||||| |||||| Sbjct 848 GCATCATCACAAACATTTCAACTTCGCTGAGTCTCGGGAGGAGACAGTGTGGCCATCGTT 789 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 788 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 729 Query 127 TAGTTACGGCCGCCG 141 ||||||||||||||| Sbjct 728 TAGTTACGGCCGCCG 714 Score = 82.4 bits (90), Expect = 2e-13 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 189 TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAA 248 |||| ||||||||||||||||||||||| ||||||| || ||| || || ||||| Sbjct 667 TTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 608 Query 249 ACCTGTGTTTTTGGTAAACAGTCGC 273 |||||||||| ||||||||||| Sbjct 607 TGCTGTGTTTTTATTAAACAGTCGC 583 >seq21601 Length=573 Score = 143 bits (158), Expect = 6e-32 Identities = 111/132 (84%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||| |||| ||| ||| ||| | |||||| | ||||||||| |||||| Sbjct 132 GCATCATCACAAACATTTCAACTTCGCTGAGTCTCAGGAGGAGACAGTGTGGCCATCGTT 73 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 13 Query 127 TAGTTACGGCCG 138 |||||||||||| Sbjct 12 TAGTTACGGCCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062145417088