Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq7472 488 2e-135 seq21912 338 2e-90 seq13289 223 1e-55 seq15497 201 3e-49 seq18386 140 1e-30 seq22859 104 7e-20 >seq7472 Length=2552 Score = 488 bits (540), Expect = 2e-135 Identities = 413/501 (82%), Gaps = 9/501 (2%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| |||||||||||||||||| || Sbjct 587 TACGGTCGCAAGACTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGTAT 528 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||||||||||||||||||| |||||||| || | || Sbjct 527 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGCCTTGACATGTCGAGAACTTTC 468 Query 121 TAGAGATAGA--GGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 |||||| || ||| |||||||| || ||||||| ||||||| ||||||| Sbjct 467 CAGAGATGGATTGGTG---CCTTCGGGAACTCGAAC-ACAGGTGCTGCATGGCTGTCGTC 412 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 411 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCCTTAGTT 352 Query 239 GCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 |||| || ||| | |||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 351 GCCAGCACGTAATGGTGGGAACTCTAAGGAGACCGCCGGTGACAAACCGGAGGAAGGTGG 292 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 ||| |||||||| |||||||| |||||| | ||||||||||||| ||||||||| Sbjct 291 GGATGACGTCAAGTCATCATGGCCCTTACGGCCAGGGCTACACACGTACTACAATGGTAG 232 Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416 ||| ||||| || | | |||| | |||| ||||||| ||| ||||||| ||| Sbjct 231 GGACAGAGGGCTGCAAGCCGGCGACGGTAAGCCAATCCCAGAAACCCTATCTCAGTCCGG 172 Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA-T 475 |||| |||||||||||||||| |||||| ||||||||||||||||| ||||||||| | Sbjct 171 ATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATT 112 Query 476 GCTACGGTGAATACGTTCCCG 496 ||| ||||||||||||||||| Sbjct 111 GCTGCGGTGAATACGTTCCCG 91 >seq21912 Length=562 Score = 338 bits (374), Expect = 2e-90 Identities = 281/342 (82%), Gaps = 1/342 (0%) Strand=Plus/Minus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| ||||||| ||||||||||||||| ||| || ||||||||||||||||||||| Sbjct 531 ACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAAC 472 Query 216 GAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGG 275 |||||||||||| | |||||||||| |||| |||| || || || | ||||||||| Sbjct 471 GAGCGCAACCCTCGTGTTTAGTTGCCAGCATTTAGTTTGGAACCCTGAACAGACTGCCGG 412 Query 276 TGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCT 335 ||| || ||||||||||||| ||| |||||||| ||||||||||||||| | ||||| Sbjct 411 TGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTACGCCCTGGGCG 352 Query 336 ACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCC 395 ||||||||||||||||| | |||||||| |||| |||||||| ||||| || | | Sbjct 351 ACACACGTGCTACAATGACCGGGACAAAGGGTCGCGACCCCGCGAGGGCAAGCTAACCTC 292 Query 396 ATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGC 455 | ||| | |||||||||||||| || |||||||||| || ||||||| |||||||| Sbjct 291 AAAAACCCGGCCTCAGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGC 232 Query 456 TAGTAATCGTAGATCAG-CATGCTACGGTGAATACGTTCCCG 496 ||||||||| | |||| ||| | |||||||| |||||||| Sbjct 231 TAGTAATCGCCGGTCAGCCATACGGCGGTGAATCCGTTCCCG 190 >seq13289 Length=1227 Score = 223 bits (246), Expect = 1e-55 Identities = 186/228 (82%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct 233 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGAT 174 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||| ||||||||| |||||||||| ||||||||| | |||||||| || | Sbjct 173 GTGGATTAATTCGATGCAACGCGAAAAACCTTACCTACCCTTGACATGTCAGGAAGACCG 114 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||||| | | | ||| ||| || ||||||| ||||||| ||||||||| Sbjct 113 AAGAGATTTGGTTGTGCCCGAAAGGGAACCTGAACACAGGTGCTGCATGGCTGTCGTCAG 54 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTT 228 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 53 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTT 6 >seq15497 Length=938 Score = 201 bits (222), Expect = 3e-49 Identities = 189/237 (80%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 267 GACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATG 326 ||||||| |||| | | ||||||||||||||| |||||||| || |||| |||||||| Sbjct 616 GACTGCCAGTGATATGCTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATG 675 Query 327 ATTTGGGCTACACACGTGCTACAATGGACAAT-ACAAAGGGCAGCGAAACCGCGAGGTCA 385 ||||| |||||||||||||||||| |||| |||| ||| ||| | ||| ||| Sbjct 676 GGCTGGGCCACACACGTGCTACAATGG-CAATGACAATGGGAAGCAAGGCCGTAAGGCGG 734 Query 386 AGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAG 445 ||| ||||| || ||| ||||||||||||||| |||||||||||| | |||||| Sbjct 735 AGCGAATCCGGAAAGATTGC-CTCAGTTCGGATTGTTCTCTGCAACTCGAGAACATGAAG 793 Query 446 CTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCGCTCCCT 502 |||||||||||||||||| ||||||||||| ||||||||| || |||| |||| Sbjct 794 TTGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCT 850 Score = 174 bits (192), Expect = 5e-41 Identities = 180/236 (76%), Gaps = 21/236 (9%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| || |||||||||||||||||| Sbjct 244 TACGGTCGCAAGACTGAAACTCAAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCAT 303 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||||| |||||||||||| ||||||| | ||| | Sbjct 304 GTGGTTTAATTCGATACAACGCGCAGAACCTTACCAGCCCTTGACA---TATGA----AC 356 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTG---------ACAGGTGATGCATGGT 171 || | | | |||| |||| | | | ||||||| ||||||| Sbjct 357 AAGTG-----TGCCTGTCCTTAACGGGATGGTGCGAAAATTCATACAGGTGCTGCATGGC 411 Query 172 TGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 ||||||||||||||||||||||||||| |||||||||| |||||||| |||||| Sbjct 412 TGTCGTCAGCTCGTGTCGTGAGATGTTTGGTTAAGTCCTATAACGAGCGAAACCCT 467 >seq18386 Length=716 Score = 140 bits (154), Expect = 1e-30 Identities = 97/110 (88%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| | ||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 111 TACGGTCGCAAGACTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 52 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCT 110 |||||||||||||| |||||||||||||||||||| |||||||| || Sbjct 51 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGCCTTGACATACT 2 >seq22859 Length=532 Score = 104 bits (114), Expect = 7e-20 Identities = 75/87 (86%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 410 AGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGAT 469 ||| ||||| | |||||||||||||||| ||||| |||||||||||||||||| ||| Sbjct 527 AGTCCGGATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGTGGAT 468 Query 470 CAGCATGCTACGGTGAATACGTTCCCG 496 ||| ||| |||||||||||||||||| Sbjct 467 CAGAATGTCACGGTGAATACGTTCCCG 441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503639596480