Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq16708 102 1e-19 seq11454 86.0 9e-15 >seq16708 Length=829 Score = 102 bits (112), Expect = 1e-19 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 |||||| || |||| ||| || | |||||||||||||| || |||| |||||| ||||| Sbjct 348 GCCCGGCGCGGGCGATTCCTCGATCACCTTCTGGTGACGGCGCTGCATCGAGCAGTCGCG 289 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 ||||| |||| || |||| || || ||||| ||| || || | || ||||| || Sbjct 288 CTCGCCGAGGTAGACCGCGTTGCGGTGCTTGTCGGCCAGCACCTGGATCTCGACGTGGCG 229 Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACC 207 ||||| ||| |||| |||| ||||||| Sbjct 228 CGGGTTCTGGAGGAACTTCTCCATGTAGACC 198 >seq11454 Length=1517 Score = 86.0 bits (94), Expect = 9e-15 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 64 GCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCC 123 || ||||||||||| | ||||||||||| || |||||||||| ||| ||||| ||| Sbjct 947 GCGGGCGCTTCTTCGATCACCTTCTGGTGGCGTCGTTGCAGCGTGCACTCGCGCTCGAAG 1006 Query 124 AGGTGGATGGCGTGGCCCTGGCCGTCG 150 || |||||| | | ||||||||||||| Sbjct 1007 AGATGGATGACCTTGCCCTGGCCGTCG 1033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735829143810