Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq14599 203 6e-50 seq13397 188 1e-45 seq7472 181 2e-43 seq13289 176 9e-42 seq18386 154 3e-35 >seq14599 Length=1052 Score = 203 bits (224), Expect = 6e-50 Identities = 150/175 (86%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct 280 GGCGTCGCTGCGTCAGGGTTTCCCCCATTGCGCAATATTCCCCACTGCTGCCTCCCGTAG 339 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||| ||||||||||||||||||||| | |||||||| ||||||||| | Sbjct 340 GAGTCTGGGCCGTATCTCAGTCCCAATGTGGCCGTCCGCCCTCTCAGGCCGGCTACCCGT 399 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 || | || ||||||| |||| | | || || | || || || ||||| |||||| Sbjct 400 CGAAGCCTAGGTGGGCCATTACCCCGCCTACAAGCTGATAGGACGCGACCCCATC 454 >seq13397 Length=1212 Score = 188 bits (208), Expect = 1e-45 Identities = 140/164 (85%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| || | |||||||| ||| || ||||||||||||||||||||| Sbjct 1024 GGCATGGCTGGATCAGGCTTGCGCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 965 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | || |||||||| || ||||| ||| Sbjct 964 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCTACAGAT 905 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCC 164 || ||||||||| || ||| |||||||||||||||||| ||| Sbjct 904 CGAAGGCTTGGTGAGCCTTTACCTCACCAACTACCTAATCTGCC 861 >seq7472 Length=2552 Score = 181 bits (200), Expect = 2e-43 Identities = 228/307 (74%), Gaps = 21/307 (7%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| || | |||||||| |||||| ||||||||||||||||||||||||||| Sbjct 1084 GCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 1143 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || |||||||||||| ||| |||||| | ||| |||||||| || ||||| |||||||| Sbjct 1144 GGACCGTGTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACGGATCGTCGC 1203 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 |||||||||| ||| | | ||||||| |||||| | | || || || | || Sbjct 1204 CTTGGTGGGCCTTTACCCCGCCAACTAGCTAATCCGACATCGGCTCA--TTCAATCGCGC 1261 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGAC--------ATTATGCGGTATTAGCGT 238 || |||| ||| ||| || | || | || |||||||||||||||| Sbjct 1262 AA-----GGTC--CGAA-GATCCCCTGCTTTCACCCGTAGGTCGTATGCGGTATTAGCGT 1313 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAG-GCAGGTTGCTCACGTGTTACTCACCCGTC 297 |||||| ||||||| || | | || || | || || | | || || |||||||||| Sbjct 1314 AAGTTTCCCTACGTTATCCCCCAC-GACAGAGTAGATT-CCGATGTATTCCTCACCCGTC 1371 Query 298 CGCCACT 304 ||||||| Sbjct 1372 CGCCACT 1378 >seq13289 Length=1227 Score = 176 bits (194), Expect = 9e-42 Identities = 135/160 (84%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| || | |||||||| ||| || ||||||||||||||||||||| Sbjct 810 GGCATTGCTGGATCAGGCTTGCGCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 869 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| |||||| | || |||||||| || ||||| ||| Sbjct 870 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCTACTGAT 929 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 ||||| ||||||| || ||| ||||||||||| |||||| Sbjct 930 CGTCGCCTTGGTGAGCCTTTACCTCACCAACTAGCTAATC 969 >seq18386 Length=716 Score = 154 bits (170), Expect = 3e-35 Identities = 103/115 (90%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct 602 GGCATGGCTGGATCAGGGTTCCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 661 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTA 115 ||||||||||||||||||||||||| |||||| | ||| |||||||| || |||| Sbjct 662 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCGGATCATCCTCTCAGACCCGCTA 716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998160753408