Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq16592 114 3e-23 >seq16592 Length=840 Score = 114 bits (126), Expect = 3e-23 Identities = 194/280 (69%), Gaps = 17/280 (6%) Strand=Plus/Minus Query 128 GTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCAC 187 ||| ||| | |||||||| | || | ||||| |||| || ||||||||||||||| Sbjct 823 GTGCACCATCTTGATGAACTGCTTGATCATCTGCTCGGTGATCACGAAGTCGGCGATCAC 764 Query 188 GCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTT 247 |||||| |||||||| || ||||| | || ||||| || |||||||||| ||| Sbjct 763 GCCGTCCTTCATCGGGCGGATGGCTTCGATGTTGCCCGGCACCTTGCCGAGCATGGCCTT 704 Query 248 GGCCTCGGTGCCGACGGCAACGA-CACTTTTCTGATTACCATG-GGTC-----------C 294 ||||||| ||||||||| || ||| || || ||||| || | | Sbjct 703 GGCCTCGCGGCCGACGGCCTGGATCAC----CTTCTTGCCATGCGGGCCGCCTTCGTGGC 648 Query 295 GAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGG 354 | ||||| || ||||| || || | ||| ||||| || | ||| || | || || | Sbjct 647 GGATGGCGACGACCGAGGGTTCGTCCAGCACGATGCCCTTGTTGCGGGCGAAGATGAGCG 588 Query 355 TGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAA 394 ||||||| ||||| ||||| || | || ||| |||| || Sbjct 587 TGTTGGCGGTGCCGAGGTCGATCGCGAGGTCGGTGGAGAA 548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353275636832