Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq7472 183 3e-44 seq15497 120 3e-25 seq21912 109 5e-22 >seq7472 Length=2552 Score = 183 bits (202), Expect = 3e-44 Identities = 137/161 (85%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||||||| |||| ||||||||||| ||| || |||| Sbjct 153 TCGAGTTGCAGACTCCAATCCGGACTGAGATAGGGTTTCTGGGATTGGCTTACCGTCGCC 212 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | || ||||||||| |||||||||| ||||||| |||||| || ||||||||| Sbjct 213 GGCTTGCAGCCCTCTGTCCCTACCATTGTAGTACGTGTGTAGCCCTGGCCGTAAGGGCCA 272 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||||||||||||||||||||||||||||| Sbjct 273 TGATGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 313 >seq15497 Length=938 Score = 120 bits (132), Expect = 3e-25 Identities = 118/151 (78%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| || Sbjct 783 TCGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACG 725 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || ||| ||| | |||||||| ||||||| |||| ||||||||||||| Sbjct 724 GCCTTGCTTCCCATTGTCATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCA 665 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCC 151 || |||||||||||||||||||||||||||| Sbjct 664 TGCGGACTTGACGTCATCCCCACCTTCCTCC 634 >seq21912 Length=562 Score = 109 bits (120), Expect = 5e-22 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | ||| || | |||||| ||||||||| Sbjct 253 CGAGTTGCAGCCTGCAATCCGAACTGAGGCCGGGTTTTTGAGGTTAGCTTGCCCTCGCGG 312 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| ||||||| ||||||| |||| | |||||| ||| Sbjct 313 GGTCGCGACCCTTTGTCCCGGTCATTGTAGCACGTGTGTCGCCCAGGGCGTAAGGGGCAT 372 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 373 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415903429110