Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq9987 271 1e-70 seq11634 259 8e-67 seq7472 109 9e-22 >seq9987 Length=1829 Score = 271 bits (300), Expect = 1e-70 Identities = 216/260 (83%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| ||||| ||||||||| ||| || |||| |||| Sbjct 1667 GCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACTTAGCTACCCGGCAATGCCACTGGCG 1608 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| ||| ||||||||||| ||||| ||||||||||||||||| | |||| || Sbjct 1607 TGACAACCGGTACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCC 1548 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 |||||||||| ||||||||| | |||||||||| ||||||||| ||||||| | ||||| Sbjct 1547 TTCAAATTTCCAACGCCCACGGCAGATAGGGACCAAACTGTCTCACGACGTTTTAAACCC 1488 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| || |||||| ||||||||||| |||||||||||| || ||||||||| Sbjct 1487 AGCTCACGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTACAGCCCCAG 1428 Query 256 GATGAGACGAGCCGACATCG 275 |||| || |||||||||||| Sbjct 1427 GATGTGATGAGCCGACATCG 1408 >seq11634 Length=1480 Score = 259 bits (286), Expect = 8e-67 Identities = 218/268 (81%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 8 GGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGC 67 |||||| |||||||||| |||||| ||||||||||| ||| ||||| || || || Sbjct 452 GGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCGAACGTAGCTAACCGGCAGCGC 511 Query 68 ACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGA 127 |||| || || || |||||||||| ||||| || ||||||||||||||| || Sbjct 512 CACTGGCGTGACGACCGGCATACCAGAGGTTCGTCCACCCAGGTCCTCTCGTACTATGGG 571 Query 128 CAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTT 187 ||| || ||||| |||| ||| | | |||||| |||| ||||||||| ||||||| Sbjct 572 CAGGTCTCCTCAACATTCCAACGAGCGCAGAGGATAGAGACCAAACTGTCTCACGACGTT 631 Query 188 CTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTC 247 |||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| || | Sbjct 632 CTGAACCCAGCTCGCGTGCCGCTTTAATCGGCGAACAGCCGAACCCTTGGGACCTGCTCC 691 Query 248 AGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||||| ||||||||||||||| Sbjct 692 AGCCCCAGGATGCGACGAGCCGACATCG 719 >seq7472 Length=2552 Score = 109 bits (120), Expect = 9e-22 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| | ||||| |||||||||| |||||| ||||| ||||| ||| ||||| ||| | Sbjct 2421 GAGGCGCGCTTCCCGCTTAGATGCTTTCAGCGGTTATCGCTTCCGAACATAGCTACCCGG 2480 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | |||| |||| ||||| || ||||||||||| ||||| ||||||||||||||| Sbjct 2481 CAATGCCACTGGCGTGACAACCGGAACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTAC 2540 Query 122 TAAGGACAGC 131 || | |||| Sbjct 2541 TAGGAGCAGC 2550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780618743868