Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq16405 383 6e-104 seq7506 370 4e-100 seq13901 152 2e-34 >seq16405 Length=855 Score = 383 bits (424), Expect = 6e-104 Identities = 212/212 (100%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 1 TCGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 644 TCGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 703 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 704 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 763 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 764 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 823 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTAT 212 |||||||||||||||||||||||||||||||| Sbjct 824 TCCGAAAACTATTTAGGTAGTGCCTCAAGTAT 855 >seq7506 Length=2542 Score = 370 bits (410), Expect = 4e-100 Identities = 377/483 (78%), Gaps = 10/483 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCG-ACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| | |||||| || |||||||||||||| |||||||| ||| Sbjct 644 CGAGTCTGATAAGGGCGCATAGTCGCGGGCAGTAGACCCGAAACCGGGTGATCTAGTCAT 703 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | ||||| ||||||||||||||||||| ||||||| ||||||||||| |||| ||| Sbjct 704 GCCCAGGGTGAAGGTGCGGTAACACGCACTGGAGGCCCGAACCCACTCCCGTTGCAAAGG 763 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||||||| |||| |||| |||||| ||||| | ||| ||| ||||||||||||| Sbjct 764 TAGGGGATGAGGTGTGATTAGGAGTGAAAAGCTAATCGAACCCGGAGATAGCTGGTTCTC 823 Query 181 TCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTAT 238 ||||| |||||||||||| ||||| | ||||| | ||||||||||||||||||||| Sbjct 824 CTCGAAAGCTATTTAGGTAGCGCCTCATATGTATC-CTCTCGGGGGTAGAGCACTGTTAT 882 Query 239 GGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAAT-GCGCATCAGTTTT 297 |||||||||||||| ||||||||||||||||||||||||||||||| || | | | Sbjct 883 GGCTAGGGGGTCATCGCGACTTACCAAACCATTGCAAACTCCGAATACCGAGACGGACTG 942 Query 298 ACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | | || | ||| ||||||||| |||||| | ||| || || || ||| Sbjct 943 TATGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAAAGGGAAACAACCCAGACC 1000 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 ||||||||| ||| || | || ||||||| || ||| | || | || ||||| Sbjct 1001 CACAGCTAAGGTCCCAAATTCACTGCTAAGTGGAA--AACCATGTGGAAAGGCACAGACA 1058 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 || |||| |||||||| |||||||||| | |||||||| |||||| |||||||| ||| Sbjct 1059 GCCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGCTCACTGGTC 1117 Query 478 GAG 480 ||| Sbjct 1118 GAG 1120 >seq13901 Length=1140 Score = 152 bits (168), Expect = 2e-34 Identities = 97/104 (93%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 1 TCGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 104 TCGAGTCCGAATAGGGCGATCAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTATCCA 45 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACC 103 |||||||||||||||||| |||||| | ||||||||||||||| Sbjct 44 TGGCCAGGATGAAGGTGCCGTAACAGGTACTGGAGGTCCGAACC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689195121152