Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq11634 549 6e-154 seq7506 338 2e-90 seq12715 307 4e-81 seq21601 291 3e-76 seq9987 284 4e-74 >seq11634 Length=1480 Score = 549 bits (608), Expect = 6e-154 Identities = 460/561 (82%), Gaps = 12/561 (2%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||||| ||||||||| | ||||||| ||||||||| |||| ||||||| Sbjct 854 TCGACCCGTCAGTCTCACAGTCAAGCCCGCTTGTGCGATTACACTCAACACCCGATTGCC 913 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||| ||||||| | ||| ||| ||||||||||||| ||| ||||| |||||||||||| Sbjct 914 AACCGGGCTGAGCGGACCATTGAGCGCCTCCGTTACTCTTTAGGAGG-CAACCGCCCCAG 972 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 ||||||||||| |||||||||||||| || | ||| | | | | |||||||| | Sbjct 973 TTAAACTACCCGCCAGGCACTGTCCCTGACACGGATAACGTGTCGAGGTTAGACGCCAGA 1032 Query 181 TACGGTCAGAGTGGTATTTCAACAA-CGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 || || |||| ||||||||| | ||||||||| |||||| ||| ||| || Sbjct 1033 TATGGAAAGAGCGGTATTTCACCTGTCGACTCCACGCAAGCTAGCGCCCACGCTTCACAG 1092 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 ||||| ||||| |||||| | || |||| || | |||||||||| |||||| ||||||| Sbjct 1093 CCTCCCGCCTATGCTACACGATCCACACCTAACGACAATACCAAGGTATAGTAAAGGTCC 1152 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 ||||||||||||||||| | |||| |||||||||||||||||||||||||||||| ||| Sbjct 1153 CGGGGTCTTTTCGTCCTTCTGCGCTTAACGAGCATCTTTACTCGTACTGCAATTTCGCCG 1212 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 ||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 1213 GGCTCCTGGCCGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 1272 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1273 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACCGGGGCTTA 1332 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 |||| |||| |||| || ||| ||| ||||||||||||||| |||||| Sbjct 1333 AATTCACCGCTTCAC------CG----AAGCTAACGGATCCTCTTAACCTTCCGGCACCG 1382 Query 540 GGCAGGCGTCAGTCCGTATAC 560 |||||||||||| ||||||| Sbjct 1383 GGCAGGCGTCAGAGCGTATAC 1403 >seq7506 Length=2542 Score = 338 bits (374), Expect = 2e-90 Identities = 358/464 (77%), Gaps = 6/464 (1%) Strand=Plus/Minus Query 13 TCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGAG 72 ||| |||||||||| | ||| ||| || ||| || | ||| || ||| |||||| Sbjct 2415 TCTTGCAGTCAAGCACGCTTATGCCTTTGCACACAGTGCGCGATGTCCGACCGCGCTGAG 2356 Query 73 GGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCA 132 | ||||| | || |||||||||| ||| ||||| | |||||||||| |||||||||| Sbjct 2355 CGTACCTTCGAGCTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCCAGTCAAACTACCCA 2297 Query 133 CCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATA-TCCACTACGGTCAGAG 191 ||| ||| |||||| |||||||| ||||||| |||||||| || | ||| ||| | Sbjct 2296 CCATACACGGTCCCCGACCCAGATAATGGGCCCAGGTTAGAACGTCAAGCACGA-CAGGG 2238 Query 192 TGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTAT 251 ||||||||||| | | |||| | | |||||| | | |||||| ||||||||||| Sbjct 2237 TGGTATTTCAAGGATGGCTCCGCTGCAGCTAGCGCCACAGTTTCATAGCCTCCCACCTAT 2178 Query 252 CCTACACAAACCGCACCGAATGC-CAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTT 309 |||||||| || | || || | || | |||||||||| ||||| | |||||||||| Sbjct 2177 CCTACACAGAC-GAACTCAACGTTCAGTGTAAAGCTATAGTAAAGGTTCACGGGGTCTTT 2119 Query 310 TCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 |||| |||| || ||| ||||||| || | | ||||||||| | | || ||| Sbjct 2118 CCGTCTTGCCACGGGAACGCTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGT 2059 Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 429 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2058 GGAGACAGCGCCGCTGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 1999 Query 430 TTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGG 473 ||||||||||||||| ||||||||||| |||||||||||||| Sbjct 1998 TTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGG 1955 Score = 143 bits (158), Expect = 9e-32 Identities = 131/165 (79%), Gaps = 8/165 (5%) Strand=Plus/Minus Query 399 CGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACC 458 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1953 CGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACG 1894 Query 459 ACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGT 518 |||||||||||||||||||| || | || || | | || ||| || Sbjct 1893 GCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGC------CTTG--CGGCTGACCCCA 1842 Query 519 CCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 | |||||||||||||||||||||||||||| || ||||| || Sbjct 1841 TCAATTAACCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTC 1797 >seq12715 Length=1303 Score = 307 bits (340), Expect = 4e-81 Identities = 354/472 (75%), Gaps = 6/472 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| |||||||||| |||| | ||| ||| ||| |||| | | ||||| || Sbjct 1210 TCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACTCTACGCGTGATTTCC 1151 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||| |||||| | ||||| | | |||||||||| ||| ||||| | ||||||||| Sbjct 1150 GACCACGCTGAGCGCACCTTCGTACTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCCAG 1092 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | |||||||||||||| || |||| | ||| ||| | ||| || |||||| || | Sbjct 1091 TCAAACTACCCACCAGACATGGTCCTCGTCCCGGATTACGGGACAGAGTTAGAA--CCTC 1034 Query 181 TACGGT--CAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 || | ||| |||||||||||| ||| ||||| |||||||| | | ||| | Sbjct 1033 AACATTACCAGGGTGGTATTTCAAGGACGGCTCCATTGGAACTAGCGTTCCAACTTCAAA 974 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 | |||||||||||||||||||| | || |||| |||||| ||| ||||| Sbjct 973 GCCTCCCACCTATCCTACACAAGTAAGGTCAAAGTTCAATGTCAAGCTGCAGTAAAGGTT 914 Query 299 C-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | |||||||||| |||| |||||| | | ||||||| || | | | ||||||| Sbjct 913 CACGGGGTCTTTCCGTCTAGCCGCGGGTACACTGCATCTTCACAGCGATTTCGATTTCAC 854 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | |||| || | |||||||| | || ||| ||||||||||||||||||||||||| Sbjct 853 TGAGCCTCTGCTGGAGACAGCGCCGCCATCATTATGCCATTCGTGCAGGTCGGAACTTAC 794 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 793 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTA 742 Score = 140 bits (154), Expect = 1e-30 Identities = 129/165 (78%), Gaps = 10/165 (6%) Strand=Plus/Minus Query 399 CGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACC 458 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 740 CGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACG 681 Query 459 ACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGT 518 |||||||||||||||||||| || | || || | || ||| || Sbjct 680 GCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTAC----------GCTAACCCCA 631 Query 519 CCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 | |||||||||||||||||||||||| ||| || ||||| || Sbjct 630 TCAATTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTC 586 >seq21601 Length=573 Score = 291 bits (322), Expect = 3e-76 Identities = 343/459 (75%), Gaps = 4/459 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| ||||||||||| |||| | ||| ||| || |||| | | ||| || Sbjct 462 TCGACTTGTCAGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCGTCACGATGTCC 403 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| || | ||||| | | |||||||||| ||||||||| | ||||||||| Sbjct 402 GACCGTAACTAGCGTACCTTCGAACTCCTCCGTTACGCTTTGGGAGGAGA-CCGCCCCAG 344 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATA-TCCA 179 | ||||| || |||| ||||||||||| | |||||| |||| || |||||||| || | Sbjct 343 TCAAACTGCCTACCATGCACTGTCCCCGATCCAGATAATGGACCTAGGTTAGAACCTCAA 284 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 || ||| ||||||||||||| | |||||||| |||||| | || ||| || Sbjct 283 ACACAC-CAGGGTGGTATTTCAACGTTGGCTCCACAAGATCTAGCGACCCTGCTTCAAAG 225 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 ||||||||||||||||||| | | | || ||||||| |||||| ||| ||||| | Sbjct 224 CCTCCCACCTATCCTACACAGATCTGTTCAAAGTCCAATACAAAGCTACAGTAAAGGTTC 165 Query 300 C-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 ||||||||| |||| | ||||| | | ||||| | || | | ||| ||| | Sbjct 164 ATGGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCT 105 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 | | || || ||||||| || ||||||||||||||||||||||||||||||||| Sbjct 104 GAGTCTCAGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACC 45 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTAC 457 |||||||||||||||||||||||||| ||||||||||| Sbjct 44 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTAC 6 >seq9987 Length=1829 Score = 284 bits (314), Expect = 4e-74 Identities = 349/470 (74%), Gaps = 10/470 (2%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC--ACCACCTGATTG 58 ||||||||| |||||||||| |||| | ||| ||| || |||| | ||| ||| Sbjct 1178 TCGACTTGTCGGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATTAGCAC--GATGT 1121 Query 59 CCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCC 118 || ||| | || | ||||| | | ||||||||||| ||| ||||| | ||||||| Sbjct 1120 CCGACCGTACCTAGCGTACCTTCGAACTCCTCCGTTACACTTTAGGAGGAGA-CCGCCCC 1062 Query 119 AGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCC 178 ||| ||||| || |||| ||||||||||| | || ||| | || ||||||||||| || Sbjct 1061 AGTCAAACTGCCTACCATGCACTGTCCCCGATCCGGATAACGGACCAAGGTTAGAA--CC 1004 Query 179 ACTACGGT--CAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCA 236 | | | ||| |||||||||||| | | |||||| ||| |||| |||| ||| Sbjct 1003 TCAAATGAACCAGGGTGGTATTTCAAGGATGGCTCCACGGGAACTGGCGTCCCCGCTTCA 944 Query 237 TAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGG 296 || ||||||||||||||||||| | | | || ||||| | |||||| ||| |||| Sbjct 943 AAGCCTCCCACCTATCCTACACAGATTGATTCAAAGTCCAATGCAAAGCTACAGTAAAGG 884 Query 297 TCCC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTC 355 | | ||||||||| |||| |||||| | | ||||| | || | | ||| ||| Sbjct 883 TTCATGGGGTCTTTCCGTCTAGCCGCGGGTAGATTGCATCATCACAAACATTTCAACTTC 824 Query 356 ACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTT 415 | | | || || ||||||| || |||||||||||||||||||||||||||||| Sbjct 823 GCTGAGTCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTT 764 Query 416 ACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCG 465 ||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 763 ACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCG 714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701992053888