Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq7472 203 7e-50 seq13397 201 2e-49 seq14599 192 1e-46 seq13289 178 3e-42 seq18386 127 4e-27 >seq7472 Length=2552 Score = 203 bits (224), Expect = 7e-50 Identities = 219/288 (76%), Gaps = 13/288 (5%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCA--CAC 58 ||||||||||||| ||||||||| ||||||||| | ||||| || ||||| || Sbjct 953 GGCTGCTGGCACGAAGTTAGCCGGTGCTTATTCTTTGGGTACCGTCA---TCCCAACCAG 1009 Query 59 GT-------GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCAT 111 || || || ||| || || | ||||| ||||||| ||| || ||||| | Sbjct 1010 GTATTAGCCGGCTGGATTTCTTTCCCAACAAAAGGGCTTTACAACCCGAAGG-CCTTCTT 1068 Query 112 CCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGC 171 | ||||| ||||||| |||| || || |||||| |||||||||| ||||||||| Sbjct 1069 CACCCACGCGGTATGGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGC 1128 Query 172 CTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACC 231 ||||||||||||| |||||||||||||||||||| ||||| || | |||||||||| | Sbjct 1129 CTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCA 1188 Query 232 CCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 ||| ||||| | || |||||||| |||||||||| |||| ||||| Sbjct 1189 GCTACGGATCGTCGCCTTGGTGGGCCTTTACCCCGCCAACTAGCTAAT 1236 >seq13397 Length=1212 Score = 201 bits (222), Expect = 2e-49 Identities = 218/285 (76%), Gaps = 7/285 (2%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACA--AGCTCCCACAC 58 ||||||||||||| ||||||||| ||||||||| || ||||| || ||| | Sbjct 1149 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTACGGTACCGTCATTAGCCTTCTTTA 1090 Query 59 GTGGAA--GGT--TTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 | ||| || ||| | || || ||||| ||||||||| ||| || |||||||||| Sbjct 1089 TTAGAAAAGGCCGTTTCGTTCCGTACAAAAGCAGTTTACAACCCGAAGG-CCTTCATCCT 1031 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| | ||||||| |||| || || |||||| |||| ||||| |||||||||||| Sbjct 1030 GCACGCGGCATGGCTGGATCAGGCTTGCGCCCATTGTCCAAAATTCCCCACTGCTGCCTC 971 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234 |||||||||| ||| |||||||||||| ||| ||||| | | |||||||||| | || Sbjct 970 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCT 911 Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | |||| ||||| |||| ||| ||||| | || |||||||||| Sbjct 910 ACAGATCGAAGGCTTGGTGAGCCTTTACCTCACCAACTACCTAAT 866 >seq14599 Length=1052 Score = 192 bits (212), Expect = 1e-46 Identities = 221/295 (75%), Gaps = 13/295 (4%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| ||||||||| |||||||| |||||||| || ||| Sbjct 173 GGCTGCTGGCACGTAGTTAGCCGGCGCTTATTCGAAAGGTACACTCA----CCC------ 222 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 ||| | || | || | ||||| |||||||| ||| || ||||||||| ||||| Sbjct 223 -GAAAGCTTGCTCCCAATC-AAAAGCGGTTTACAACCCGAAGG-CCTTCATCCCGCACGC 279 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | |||| |||| | || |||||| ||||||||| |||||||||||||||||| Sbjct 280 GGCGTCGCTGCGTCAGGGTTTCCCCCATTGCGCAATATTCCCCACTGCTGCCTCCCGTAG 339 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||| ||||||| ||||||||| | || |||||||| | ||| || | Sbjct 340 GAGTCTGGGCCGTATCTCAGTCCCAATGTGGCCGTCCGCCCTCTCAGGCCGGCTACCCGT 399 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 || || ||||||||||| ||||||||||||| | || || | |||| ||||||| Sbjct 400 CGAAGCCTAGGTGGGCCATTACCCCGCCTACAAGCTGATAGGACGCGACCCCATC 454 >seq13289 Length=1227 Score = 178 bits (196), Expect = 3e-42 Identities = 214/290 (74%), Gaps = 17/290 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| ||||||||| ||||||||| | |||||| || | || | Sbjct 685 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCAGGTACCGTCAT--TAGGAC---T 739 Query 61 GGAAGGT-----------TTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTC 109 ||| | ||| |||||| | |||||| ||||||| ||| || ||||| Sbjct 740 GGATATTAGCCAATCCCGTTTCTTCCCTGACAAAAGAGCTTTACAACCCGAAGG-CCTTC 798 Query 110 ATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCT 169 || |||||| | | ||||| |||| || || |||||| |||| ||||| ||||||| Sbjct 799 TTCACTCACGCGGCATTGCTGGATCAGGCTTGCGCCCATTGTCCAAAATTCCCCACTGCT 858 Query 170 GCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAA 229 ||||||||||||||| |||||||||||||||||||| ||||| | | |||||||||| Sbjct 859 GCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCGTCCTCTCAGAC 918 Query 230 CCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | ||| ||||| | || |||| ||| ||||| | || |||| ||||| Sbjct 919 CAGCTACTGATCGTCGCCTTGGTGAGCCTTTACCTCACCAACTAGCTAAT 968 >seq18386 Length=716 Score = 127 bits (140), Expect = 4e-27 Identities = 117/147 (80%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||| || || ||||| || ||||| | ||||||| |||| | | |||| Sbjct 571 TTTACAA-CCATAAGGCCTTCTTCACACACGCGGCATGGCTGGATCAGGGTTCCCCCCAT 629 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 630 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 689 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTA 235 ||| ||| | |||||||||| || ||| Sbjct 690 TGGCGGATCATCCTCTCAGACCCGCTA 716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068543883456