Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brugia_20timori_20[genbank_20GCA_5F000950975.1_202014-09-24] 23,963 sequences; 64,930,714 total letters Query= NC_029107.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq19355 178 3e-40 >seq19355 Length=665 Score = 178 bits (196), Expect = 3e-40 Identities = 354/518 (68%), Gaps = 10/518 (2%) Strand=Plus/Plus Query 8956 CTGGTGCCCCGGTCGTTGGTTAAACCCATCGACCTGGCCCGCGACGAGCTGGTCCAAGAG 9015 ||||||||| | | | | || || ||||| ||||| |||||| ||||||| || ||| Sbjct 84 CTGGTGCCCGAGGCACAGATCAAGCCGATCGATCTGGCGCGCGACCAGCTGGTGCAGGAG 143 Query 9016 ATGGTGACCAAGGCGAA--GACGATGCGCCAACAGCTGCAGGCGCTCAAGACCGCCTTCT 9073 | | | ||| ||| | | ||||| || | |||| | ||||| | | | | Sbjct 144 AAGAT--CCAGCGCGCCCTGCAGCTGCGCGAAGAACTGCGCACCTTCAAGGCGGACACGT 201 Query 9074 TTGGAGAC-TTCCAGGCGTTCGTCAAGCTGTCAGCCGAGGAGTACGGCGTCCAGCGCGGC 9132 | | ||| || ||| | ||||| |||| | |||| ||||||||| | | |||| Sbjct 202 TCGCTGACATTGCAGCC-TTCGTGCAGCTCAGTGGCGAGCAGTACGGCGCCAAAATCGGC 260 Query 9133 GGCAGCAAAGGCAACGTGACCCTCCACAGCTTCGACGGCCGTTACAAGGTCCGACTGGCC 9192 ||| ||| |||||||||| ||| ||| || ||||||||| |||||| ||| | ||| Sbjct 261 GGCGACAAGGGCAACGTGAGCCTGTACACCTACGACGGCCGCTACAAGATCCTGCGCGCC 320 Query 9193 CATGCC--GACACCATGAAGTTTGACGAGCGTCTGCAGGCCGCCAAGACCATCATTGACG 9250 |||| |||| || | || |||||||| |||||||| |||||| || |||| || | Sbjct 321 --TGCCAGGACAGTATCCAATTCGACGAGCGCCTGCAGGCGGCCAAGGCCCTCATCGATG 378 Query 9251 ACCTGATGACCGAGTGGACAGAGGGATCGCGCCCCGAAATCAAGGCCATCATCCAGCGCG 9310 | ||| ||| ||||| || || || || ||||| | || | || | ||| Sbjct 379 AGTGCCTGAACGACTGGACCGAAGGCTCCCGAGCCGAACTGCGCACCTTGGTCAATAGCG 438 Query 9311 CTTTCGACACCGACAAAGAGGGCAACTTGAACACCGGCCGCGTGCTGTCGCTGCGCAGTC 9370 | ||| | | | | || |||| | | || |||||| ||||| ||||||| | | Sbjct 439 CCTTCAAGGTGGGCCAGGACGGCAGCATCAAGACCGGCGAGGTGCTCTCGCTGCATCGCC 498 Query 9371 TGGACATCAAGGATGCGCGTTGGCAGCAGGCGATGACCGCGATTGGCGACAGCGTCCAGG 9430 | | || | ||| |||| |||||||||||||||| || || ||||| || || Sbjct 499 TCAAGTTCGATGATCCGCGCTGGCAGCAGGCGATGAAGGCCATCAGCGACGCGGTGACGG 558 Query 9431 TCGTGGGCACCAAGAGCTACGTGCGCTTCTATGAGCGC 9468 | ||||||| ||||| ||| ||||| ||||| |||||| Sbjct 559 TGGTGGGCAGCAAGACCTATGTGCGGTTCTACGAGCGC 596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134051443379618