Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2162 232 3e-58 >seq2162 Length=1831 Score = 232 bits (256), Expect = 3e-58 Identities = 236/305 (77%), Gaps = 27/305 (9%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT--GTC 462 || ||||||||| ||||||||||||||||| || | | || ||| |||||| ||| Sbjct 1326 CGACCCGTCTTGAAACACGGACCAAGGAGTTTATGGTATGCGCAAGTCATTGGGTTTGTC 1385 Query 463 AAACCCGTGCG-CGTAATGAAAGTGA----------------ACG-GA---GGTG-GGAA 500 || || | |||||||||||||| ||| || |||| || | Sbjct 1386 GAAGCCTAAAGGCGTAATGAAAGTGAGACATTACTTGTCTGAACGTGACTGGGTGCGGCA 1445 Query 501 CCCGTGAGGGT---GCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 |||| || ||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct 1446 TTCGTGCGGCCCAAGCATCATCGACCGATCTTGATGTCTTCGGATGGATTTGAGTAAGAG 1505 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 |||| | || ||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 1506 CATATTGGGTGCGACCCGAAAGATGGTGAACTATGCCTGAACAGGACGAAGCCAGAGGAA 1565 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677 ||||||||||| | || |||||||||| ||||||||||||||||| |||| ||||||| Sbjct 1566 ACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGATTTTGGTATAG 1625 Query 678 GGGCG 682 ||||| Sbjct 1626 GGGCG 1630 Score = 122 bits (134), Expect = 4e-25 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||||||||| || ||||| | || | || |||||| ||| |||| ||||||| Sbjct 802 GAGTCGGGTTGTTTGGAAACGCAGCCCAAAGTTGGTGGTAAACTTCACCTAAGGCTAAAT 861 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | ||||||||||| ||||||| |||| ||||| ||||||| |||||| || Sbjct 862 ACGACCGCGAGACCGATAGAAAACAAGTACCGTGAGGGAAAGTTGAAAAGTACTTTGAAA 921 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||| || || |||||||| | || || ||||||| Sbjct 922 AGAGAGTGCAAGAGAACGTGAAACCGGTGTAATGGAAGCG 961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079776233600