Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2093 345 7e-93 seq9050 183 5e-44 >seq2093 Length=1307 Score = 345 bits (382), Expect = 7e-93 Identities = 232/259 (90%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 485 CAGTAGGATAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 544 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||||||| || |||||||| || ||||||||||||||||||||| Sbjct 545 TGGGTGAACAATCCAACGCTTTGCGCATTCTGCTACGCAATGATAGGAAGAGCCGACATC 604 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 605 GAAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 664 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274 ||||||||||||| ||||||| || ||| || | |||||||||||||||||| Sbjct 665 GGTAACTTTTCTGACACCTCTTGCTGTAAACTTTACAAATCGAAAGGATCGATAGGCCAC 724 Query 275 ACTTTCATGGTTTGTATTC 293 ||||| ||| ||||||| Sbjct 725 GCTTTCGCGGTCTGTATTC 743 >seq9050 Length=5602 Score = 183 bits (202), Expect = 5e-44 Identities = 130/149 (87%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 145 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 5602 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAG 5543 Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 ||||||||||||||||||||||| ||||||| || ||| || | |||||||| Sbjct 5542 TTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTGTAAACTTTACAAATCGAAAGGATC 5483 Query 265 GATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||||| ||||| ||| ||||||| Sbjct 5482 GATAGGCCACGCTTTCGCGGTCTGTATTC 5454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854310868992