Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq9055 118 2e-24 seq2159 118 2e-24 >seq9055 Length=11447 Score = 118 bits (130), Expect = 2e-24 Identities = 163/222 (73%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| | Sbjct 142 TTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTTCGGGGCCGCACGCGTGCTACAAT 200 Query 169 GACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATC--TTGTTAAACTC 226 | | || || | | | |||| ||| ||| | || || | ||| | | | Sbjct 201 GGTGGTAACAGCGTGAT--TGTCCTTTTCCGACAGGAATTGGCAAACAGTTGAGATATTA 258 Query 227 TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGC 286 | | ||| || || ||| ||| |||| | ||| | |||||||||| || ||||| Sbjct 259 T-TATGGCT-GGAATTGAGTGTTGAAATTTTCTCTCATGAACGAGGAATTCCAAGTAAAT 316 Query 287 GCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||||| | | || |||||||||||||||||||||||| Sbjct 317 GTGAGTCATTAACTTGCATTGATTACGTCCCTGCCCTTTGTA 358 >seq2159 Length=1865 Score = 118 bits (130), Expect = 2e-24 Identities = 163/222 (73%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| | Sbjct 1126 TTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTTCGGGGCCGCACGCGTGCTACAAT 1184 Query 169 GACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATC--TTGTTAAACTC 226 | | || || | | | |||| ||| ||| | || || | ||| | | | Sbjct 1185 GGTGGTAACAGCGTGAT--TGTCCTTTTCCGACAGGAATTGGCAAACAGTTGAGATATTA 1242 Query 227 TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGC 286 | | ||| || || ||| ||| |||| | ||| | |||||||||| || ||||| Sbjct 1243 T-TATGGCT-GGAATTGAGTGTTGAAATTTTCTCTCATGAACGAGGAATTCCAAGTAAAT 1300 Query 287 GCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||||| | | || |||||||||||||||||||||||| Sbjct 1301 GTGAGTCATTAACTTGCATTGATTACGTCCCTGCCCTTTGTA 1342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947101188096