Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2093 493 4e-137 seq3928 432 1e-118 seq9050 338 2e-90 seq8832 297 6e-78 seq8175 260 5e-67 seq9048 257 5e-66 seq9051 255 2e-65 seq2231 187 8e-45 seq2166 185 3e-44 >seq2093 Length=1307 Score = 493 bits (546), Expect = 4e-137 Identities = 430/528 (81%), Gaps = 20/528 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| || |||| || || |||| ||||||||||||| ||||| Sbjct 777 CTTTTACTCTACGTAAGGTTTCCGTCCTTACTGAGCTTACCTTAGGACACCTACGTTACT 836 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| | |||||| ||||||||| |||||||||| ||||||||||||||| | ||| || Sbjct 837 GTTTGATAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACAATGTCATCGGCGCGGGTC 896 Query 127 G---GCCCGCGAAGGAC-----CTTAACGCCAGA---AAATGGTCGGTGAAGACCAGTTC 175 | || | | ||| || ||||| || || | || | ||| || |||| Sbjct 897 GCCGGCGCACCAAGTACGCCGGCTTAAAATCAATCACAAGTTTTCAGAGAAAAC--GTTC 954 Query 176 CGCTTCATT---GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG--CCG 230 | | | ||| || ||||||| ||||||| | |||||||||||||||| || ||| Sbjct 955 CCCGT-ATTACCGAATAAGTAAGGAAACGATGAAAGTAGTGGTATTTCACTGACGTGCCG 1013 Query 231 AAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAA 290 |||| ||||||||||| ||||||| || | ||||||||||| |||||||||||| Sbjct 1014 AAACA-CTCCCACTTATACTACACCATGCATGATTCTTCACAAAGTCAGACTAGAGTCAA 1072 Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct 1073 GCTCAACAGGGTCTTCTTTCCCCGCTGTCTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTT 1132 Query 351 CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 410 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1133 CGCTAGATAGTAGTTAGGGACAGTGGGAATCTCGTTAATCCATTCATACGCGTCACTAAT 1192 Query 411 TAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC 470 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1193 TAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC 1252 Query 471 GCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 |||| | |||||| | | || |||||||||||||||||||||||| Sbjct 1253 GCTTACTCAAATTTCCTTAAATTAACATTCAGAGCACTGGGCAGAAAT 1300 >seq3928 Length=637 Score = 432 bits (478), Expect = 1e-118 Identities = 300/338 (89%), Gaps = 3/338 (1%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG--CCGAAACGGCTCCCA 242 || ||||||| ||||||| | |||||||||||||||| || ||||||| |||||| Sbjct 40 GAATAAGTAAGGAAACGATGAAAGTAGTGGTATTTCACTGACGTGCCGAAACA-CTCCCA 98 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||| ||||||| || | ||||||||||| |||||||||||||||||||||||| Sbjct 99 CTTATACTACACCATGCATGATTCTTCACAAAGTCAGACTAGAGTCAAGCTCAACAGGGT 158 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 159 CTTCTTTCCCCGCTGTCTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 218 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 | ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 219 GTTAGGGACAGTGGGAATCTCGTTAATCCATTCATACGCGTCACTAATTAAATGACGAGG 278 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 279 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTACTCAAAT 338 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||| | | || |||||||||||||||||||||||||| Sbjct 339 TTCCTTAAATTAACATTCAGAGCACTGGGCAGAAATCA 376 >seq9050 Length=5602 Score = 338 bits (374), Expect = 2e-90 Identities = 329/417 (79%), Gaps = 20/417 (5%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| || |||| || || |||| ||||||||||||| ||||| Sbjct 5420 CTTTTACTCTACGTAAGGTTTCCGTCCTTACTGAGCTTACCTTAGGACACCTACGTTACT 5361 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| | |||||| ||||||||| |||||||||| ||||||||||||||| | ||| || Sbjct 5360 GTTTGATAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACAATGTCATCGGCGCGGGTC 5301 Query 127 G---GCCCGCGAAGGAC-----CTTAACGCCAGA---AAATGGTCGGTGAAGACCAGTTC 175 | || | | ||| || ||||| || || | || | ||| || |||| Sbjct 5300 GCCGGCGCACCAAGTACGCCGGCTTAAAATCAATCACAAGTTTTCAGAGAAAAC--GTTC 5243 Query 176 CGCTTCATT---GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG--CCG 230 | | | ||| || ||||||| ||||||| | |||||||||||||||| || ||| Sbjct 5242 CCCGT-ATTACCGAATAAGTAAGGAAACGATGAAAGTAGTGGTATTTCACTGACGTGCCG 5184 Query 231 AAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAA 290 |||| ||||||||||| ||||||| || | ||||||||||| |||||||||||| Sbjct 5183 AAACA-CTCCCACTTATACTACACCATGCATGATTCTTCACAAAGTCAGACTAGAGTCAA 5125 Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350 ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct 5124 GCTCAACAGGGTCTTCTTTCCCCGCTGTCTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTT 5065 Query 351 CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 5064 CGCTAGATAGTAGTTAGGGACAGTGGGAATCTCGTTAATCCATTCATACGCGTCACT 5008 >seq8832 Length=5809 Score = 297 bits (328), Expect = 6e-78 Identities = 283/355 (80%), Gaps = 18/355 (5%) Strand=Plus/Plus Query 67 GTTTAACAGAT-GTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125 |||| | |||| || ||||||||| |||||||||| ||||||||||||||| | ||| | Sbjct 1 GTTTGATAGATAGTACCGCCCCAGTCAAACTCCCCGCCTGACAATGTCATCGGCGCGGGT 60 Query 126 CG---GCCCGCGAAGGAC-----CTTAACGCCAGA---AAATGGTCGGTGAAGACCAGTT 174 || || | | ||| || ||||| || || | || | ||| || ||| Sbjct 61 CGCCGGCGCACCAAGTACGCCGGCTTAAAATCAATCACAAGTTTTCAGAGAAAAC--GTT 118 Query 175 CCGCT-TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG--CCGA 231 || | | | || ||||||| ||||||| | |||||||||||||||| || |||| Sbjct 119 CCCGTATTACCGAATAAGTAAGGAAACGATGAAAGTAGTGGTATTTCACTGACGTGCCGA 178 Query 232 AACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAG 291 ||| ||||||||||| ||||||| || | ||||||||||| ||||||||||||| Sbjct 179 AACA-CTCCCACTTATACTACACCATGCATGATTCTTCACAAAGTCAGACTAGAGTCAAG 237 Query 292 CTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTC 351 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct 238 CTCAACAGGGTCTTCTTTCCCCGCTGTCTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTC 297 Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCAC 406 |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 298 GCTAGATAGTAGTTAGGGACAGTGGGAATCTCGTTAATCCATTCATACGCGTCAC 352 Score = 183 bits (202), Expect = 1e-43 Identities = 119/131 (91%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 449 || ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 5535 CCCTTCATACGCGTCACTAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 5594 Query 450 TTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTG 509 ||||||||||||||||||||||||| | |||||| | | || ||||||||||||||| Sbjct 5595 TTACTCCCGCCGTTTACCCGCGCTTACTCAAATTTCCTTAAATTAACATTCAGAGCACTG 5654 Query 510 GGCAGAAATCA 520 ||||||||||| Sbjct 5655 GGCAGAAATCA 5665 >seq8175 Length=5382 Score = 260 bits (288), Expect = 5e-67 Identities = 185/210 (88%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 200 CGATAAGGGTAGTGGTATTTCACTTGCG--CCGAAACGGCTCCCACTTATTCTACACCTC 257 |||| | |||||||||||||||| || ||||||| ||||||||||| ||||||| Sbjct 5382 CGATGAAAGTAGTGGTATTTCACTGACGTGCCGAAACA-CTCCCACTTATACTACACCAT 5324 Query 258 TCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTG 317 || | ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 5323 GCATGATTCTTCACAAAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTG 5264 Query 318 ATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGG 377 | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 5263 TCTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGTTAGGGACAGTGGG 5204 Query 378 AATCTCGTTAATCCATTCATGCGCGTCACT 407 |||||||||||||||||||| ||||||||| Sbjct 5203 AATCTCGTTAATCCATTCATACGCGTCACT 5174 Score = 176 bits (194), Expect = 1e-41 Identities = 112/122 (92%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 315 CGCGTCACTAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 256 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 |||||||||||||||| | |||||| | | || |||||||||||||||||||||||| Sbjct 255 CCGTTTACCCGCGCTTACTCAAATTTCCTTAAATTAACATTCAGAGCACTGGGCAGAAAT 196 Query 519 CA 520 || Sbjct 195 CA 194 >seq9048 Length=5760 Score = 257 bits (284), Expect = 5e-66 Identities = 179/201 (89%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 208 GTAGTGGTATTTCACTTGCG--CCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCA 265 |||||||||||||||| || ||||||| ||||||||||| ||||||| || | Sbjct 5757 GTAGTGGTATTTCACTGACGTGCCGAAACA-CTCCCACTTATACTACACCATGCATGATT 5699 Query 266 TTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCC 325 ||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 5698 CTTCACAAAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGTCTTTGCC 5639 Query 326 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 385 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 5638 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGTTAGGGACAGTGGGAATCTCGT 5579 Query 386 TAATCCATTCATGCGCGTCAC 406 |||||||||||| |||||||| Sbjct 5578 TAATCCATTCATACGCGTCAC 5558 Score = 178 bits (196), Expect = 4e-42 Identities = 115/126 (91%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 395 CATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT 454 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 332 CATACGCGTCACTAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT 273 Query 455 CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514 |||||||||||||||||||| | |||||| | | || |||||||||||||||||||| Sbjct 272 CCCGCCGTTTACCCGCGCTTACTCAAATTTCCTTAAATTAACATTCAGAGCACTGGGCAG 213 Query 515 AAATCA 520 |||||| Sbjct 212 AAATCA 207 >seq9051 Length=5967 Score = 255 bits (282), Expect = 2e-65 Identities = 178/200 (89%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 209 TAGTGGTATTTCACTTGCG--CCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCAT 266 ||||||||||||||| || ||||||| ||||||||||| ||||||| || | Sbjct 5967 TAGTGGTATTTCACTGACGTGCCGAAACA-CTCCCACTTATACTACACCATGCATGATTC 5909 Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 ||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 5908 TTCACAAAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGTCTTTGCCA 5849 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 5848 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGTTAGGGACAGTGGGAATCTCGTT 5789 Query 387 AATCCATTCATGCGCGTCAC 406 ||||||||||| |||||||| Sbjct 5788 AATCCATTCATACGCGTCAC 5769 Score = 129 bits (142), Expect = 2e-27 Identities = 78/81 (96%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 449 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 80 CCATTCATACGCGTCACTAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 21 Query 450 TTACTCCCGCCGTTTACCCGC 470 |||||||||||||||||||| Sbjct 20 -TACTCCCGCCGTTTACCCGC 1 >seq2231 Length=705 Score = 187 bits (206), Expect = 8e-45 Identities = 120/131 (92%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 449 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 355 CCATTCATACGCGTCACTAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 414 Query 450 TTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTG 509 ||||||||||||||||||||||||| | |||||| | | || ||||||||||||||| Sbjct 415 TTACTCCCGCCGTTTACCCGCGCTTACTCAAATTTCCTTAAATTAACATTCAGAGCACTG 474 Query 510 GGCAGAAATCA 520 ||||||||||| Sbjct 475 GGCAGAAATCA 485 >seq2166 Length=1151 Score = 185 bits (204), Expect = 3e-44 Identities = 119/130 (92%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 391 CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 450 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 704 CATTCATACGCGTCACTAATTAAATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 763 Query 451 TACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGG 510 |||||||||||||||||||||||| | |||||| | | || |||||||||||||||| Sbjct 764 TACTCCCGCCGTTTACCCGCGCTTACTCAAATTTCCTTAAATTAACATTCAGAGCACTGG 823 Query 511 GCAGAAATCA 520 |||||||||| Sbjct 824 GCAGAAATCA 833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635029415936