Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2159 201 3e-49 seq2145 138 3e-30 >seq2159 Length=1865 Score = 201 bits (222), Expect = 3e-49 Identities = 188/238 (79%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||| | || | |||||| | | | ||||| | |||||||||| Sbjct 238 GTACTCATTCCAATAATC-GATCTCAAAGAGAACGATCTTGTTATTTCTCGTCACTACCT 180 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | ||| | | |||||||||||| |||||||||||| ||||| || ||||||||||| Sbjct 179 CATCGTTTTGATATTGGGTAATTTTCGCGCCTGCTGCTATCCTTAGACATGGTAGCCGTT 120 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||| |||||||||||||||| || |||||| |||| ||||||||||| | ||||||||| Sbjct 119 TCTAAGGCTCCCTCTCCGGAGTCAAACCCTGATTCTCCGTTACCCGTCAACACCATGGTA 60 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 | ||| || |||||| ||| |||||||| ||||| | ||||| ||| | ||||||| Sbjct 59 GACCAATAAACTACCAACGATAGTTGATAAAGCAGATACTTGAAAGAAACTTCGCCGG 2 >seq2145 Length=1135 Score = 138 bits (152), Expect = 3e-30 Identities = 214/297 (72%), Gaps = 13/297 (4%) Strand=Plus/Plus Query 198 CGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCG 257 ||| |||||||| ||||| | ||||| ||| | ||||||| |||| ||||||||| | Sbjct 3 CGATAGTTGATAAAGCAGATACTTGAAAGAAACTTCGCCGGTACAAGACCATGCGATATG 62 Query 258 TTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATA 317 | |||| ||| | | ||| || | || | | ||||||| || ||||| | Sbjct 63 CAGAATTATCCTGAGTTAGCAAACAGTAC-GA--GAC--TGGTTTTGC-TCCAATAATTG 116 Query 318 CACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT 375 ||||| |||| | | ||| || ||||||||| |||| ||||||||| | ||||| Sbjct 117 CACCCTAACCGAGCGGCCAGGGCTTGATGCATGTATTGGCTCCAGAATTACCGCAGTTAT 176 Query 376 CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTC 435 |||| ||| || | | | | |||| ||| ||| | ||||||||| ||||||||||| Sbjct 177 CCATATAGAAAC--AAGAACTAGTAAATTATATCTGTTGTAATGAGCCGTTCGCAGTTTC 234 Query 436 ACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 || |||| | || |||||||||||||||||| ||||||||| | || ||||| Sbjct 235 GCTATATAA--TACTCC-ACTTAGACATGCATGGCTAAATCTTTGAAAGAAACATAT 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510242435072