Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bursaphelenchus_20xylophilus_20[genbank_20GCA_5F000231135.1_202011- 10-13] 10,432 sequences; 73,085,728 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8564 102 6e-17 seq8142 87.8 1e-12 seq5271 84.2 2e-11 >seq8564 Length=72546 Score = 102 bits (112), Expect = 6e-17 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 61211 TGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGC 61270 |||| || ||||| |||||||| || ||||| || |||||| | | || |||||| Sbjct 47580 TGGCCTTTTTTGCGGCTTCGGATGGAATCGTTAACGAGAATCTGATCGAGCGTTTCAATG 47521 Query 61271 AGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATG 61330 || ||| || | | ||||| | |||||||| || ||||| ||| |||||||| Sbjct 47520 CCGAAGTGAAACTTCCTGAGGCTAGGTGTTTCTATGGATTCCAAATTATGATGGAGAACA 47461 Query 61331 TCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 | ||||||||||||||| | |||| || ||||| || ||||| || Sbjct 47460 TTCACTCGGAGATGTACTCTATTCTGATTGATACATATATCAGTGA 47415 >seq8142 Length=52432 Score = 87.8 bits (96), Expect = 1e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 65771 GCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACT 65830 |||| ||||| | |||||| | |||||| | ||| | |||||||||||| || ||| Sbjct 5649 GCCTTGTCGCTGGTGAACGGCAGTCTCATCAGCATAAAGGCGTCGGCCAGACCCTGGACT 5708 Query 65831 CCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAA 65890 || || |||||||||||||| || | |||||| | |||||| | ||||||||| Sbjct 5709 CCGATTCCGATGGGACGATGGCGGAGATTGGACTTGCGCGCCTCTTCGATGGGGTAGTAA 5768 Query 65891 TTGATATCGAT 65901 |||| ||| || Sbjct 5769 TTGACATCAAT 5779 Score = 87.8 bits (96), Expect = 1e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 ||||| | |||||| || || | |||||| || | || || |||| || || |||||| Sbjct 6321 GATGCCAAGTTGCACACCGCGACCTCGTCCGGCGAGGAGTATTCGATGATCTCCGTGCAC 6380 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 | || ||| |||||||||||||| || ||||| ||| || ||||| |||| Sbjct 6381 AAGTTGGAGCACTTGATGGTGCCCAAATTTTGCTGATTCGACTTTCGGTTGCAATGATCC 6440 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 ||||| | ||| || || || || || |||||||| ||||| || ||||| ||| Sbjct 6441 TTGTAGACCATATAAGGCAATCCAGTTTCGCATTGGGACTTGATGATTGCTTGCCAGAGA 6500 Query 66194 GCGCGTGC 66201 | || || Sbjct 6501 TCACGAGC 6508 >seq5271 Length=37008 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/113 (77%), Gaps = 1/113 (1%) Strand=Plus/Plus Query 65804 ACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAA 65863 |||||| || | || ||||||||||||||| || ||||| ||||| | |||||||||| Sbjct 21657 ACAAAAAAGTGGACC-GACCTTGAACTCCAAGTCCAATGGGCCGATGCCTCAAATTGGAA 21715 Query 65864 CGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATT 65916 ||| | || || || || || ||| |||| |||||| || ||||||||| Sbjct 21716 CGTTTGGCATCCGGAACTGGATAGAAATTCCCATCGATGATCTTATTCAAATT 21768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397517453204480