Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq14733 152 1e-34 >seq14733 Length=4620 Score = 152 bits (168), Expect = 1e-34 Identities = 239/336 (71%), Gaps = 7/336 (2%) Strand=Plus/Plus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| || ||||| | || ||||| Sbjct 2212 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTTTGCTTACAATCCGTTGGAGCA 2270 Query 61 GAGTGATTCG-GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAG 119 | | | ||||| |||||||||||| | ||||||||| |||||||| | | Sbjct 2271 CCCTTGTAGGTGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGCGATATGTGG 2330 Query 120 CGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG- 178 ||||||||| | | || | |||||| || ||||||||| || || |||||| Sbjct 2331 CGAGGTTAACC-CGTGTGG---GGTAGCCGTAGCGAAAGCGAGTCTGAATAGGGCGGTTC 2386 Query 179 AGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGT 238 ||| | | |||||| |||| | |||||||| ||| | |||||||||| |||| Sbjct 2387 AGTCGCATGTCCTAGACCCGAAGCGAAGTGATCTATCCATGGCCAGGTTGAAGCGACGGT 2446 Query 239 AACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTA 298 || ||| |||||||||||||| | |||||||| | |||||| | || || Sbjct 2447 AAGACGTCGTGGAGGACCGAACCCACTTAGGTTGAAAACTGAGGGGATGAGCTGTGGATA 2506 Query 299 GGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||||||||| | |||||| || Sbjct 2507 GGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGT 2542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972473538048