Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq32051 73.4 6e-11 >seq32051 Length=19224 Score = 73.4 bits (80), Expect = 6e-11 Identities = 56/64 (88%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 3 ACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCT 62 |||||||||||||||||| |||||| |||| ||||||||| | ||||||||| ||||| Sbjct 5172 ACAAAGGGCAGGGACGTAATCAACGTGAGC-TGATGACTCACACTTACTAGG-CGTTCCT 5229 Query 63 CGTT 66 |||| Sbjct 5230 CGTT 5233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751755522685