Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq14733 324 4e-86 >seq14733 Length=4620 Score = 324 bits (358), Expect = 4e-86 Identities = 324/414 (78%), Gaps = 11/414 (3%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 117 TACCTGCAGAAAAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 176 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAGACAGGTG 121 ||||||| |||||||| ||||||||||| | || |||||| |||| | | | || Sbjct 177 AAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTAGGCGGCTTGT-CGCGTCTGCTG 235 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGAC-TGCACGACTAGAGTGTGTCA 180 ||||| ||| |||| ||||| || |||| | | || ||| | |||||||| | | Sbjct 236 TGAAAACCCGAGGCTCAACCTCGGGCCTGCAGTGGGTACGGGCAAG-CTAGAGTGCGGTA 294 Query 181 GAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT 240 | || | ||||||||| ||||||| ||| |||||| |||||| ||||||||||| || Sbjct 295 GGGGAGATTGGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGAT 354 Query 241 GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300 ||||||||||| | ||||| ||||||||| | | ||||||| |||||||| ||| Sbjct 355 GGCGAAGGCAGATCTCTGGGCCGTAACTGACGCTGAGGAGCGAAAGCATGGGGAGCGAAC 414 Query 301 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTA 360 |||||||||||||||||||||||| ||| |||||| | |||||| ||| ||| | | Sbjct 415 AGGATTAGATACCCTGGTAGTCCATGCCGTAAACGTTGGGAACTAGATGTAGGGACTGTT 474 Query 361 C-----TTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || || |||||||||||| | ||||| ||||||||||| ||| Sbjct 475 CCACGGTTTCT--GTGTCGTAGCTAACGCATTAAGTTCCCCGCCTGGGGAGTAC 526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289167223136