Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq14733 259 7e-67 >seq14733 Length=4620 Score = 259 bits (286), Expect = 7e-67 Identities = 213/254 (84%), Gaps = 8/254 (3%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||| || |||| | || || |||| Sbjct 3703 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACGTCCACTTGC-GTGTTAGCAC 3645 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCT-- 118 |||||||||||||||||||||||||||||||| || |||||||| ||||||| || Sbjct 3644 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCACTGGTCTCTGCGGCCACCACACCCTTT 3585 Query 119 --CAA-CACGTCGTTCACCAGCAG-TGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTT 174 ||| || || | | | ||| | |||| ||||||||||||||||||||||| |||||| Sbjct 3584 CCCAAGCAAGTTGGT-ATAAGCGGATGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTT 3526 Query 175 GCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGT 234 ||||| |||||| ||||| ||| | ||| | ||||||||||||||||||||||||||| Sbjct 3525 GCCGAGTTCCTTCACCACGATTCTCTCGATCTCCTTAGTATTCTCTACCTGACCACCTGA 3466 Query 235 GTCGGTTTACGGTA 248 |||||||| |||| Sbjct 3465 GTCGGTTTGGGGTA 3452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694174248607