Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq14733 105 6e-21 >seq14733 Length=4620 Score = 105 bits (116), Expect = 6e-21 Identities = 87/106 (82%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 || || ||| ||||| | ||||||||||| ||||||||||| | ||| |||||| Sbjct 3597 GGCCGCAGAGACCAGTGGGAAGCGACTGTTTACTAAAAACACAGGTCCGTGCTAACACGC 3656 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||||||| || ||||||||||||||||| |||||||||| Sbjct 3657 AAGTGGACGTATACGGACTGACGCCTGCCCGGTGCTGGAAGGTTAA 3702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476644990979