Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq14733 293 5e-77 >seq14733 Length=4620 Score = 293 bits (324), Expect = 5e-77 Identities = 288/376 (77%), Gaps = 28/376 (7%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | ||||||| |||||| || || ||||||| || ||||| Sbjct 3886 GCATCTTTACTCGTAATGCAATTTCGCCGAGTTCATGGTGGAGACAGCTGGGAAGTCGTT 3827 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 3826 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 3767 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTG--CTCTAACAGAT 184 ||||||| ||||||||||||||||||||| |||| ||||||| | |||||| | Sbjct 3766 TAGTTACCACCGCCGTTTACTGGGGCTTAAATTCAAAGCTTCGACCGAAGTCTAACCTCT 3707 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 || |||||||||||||||||||||||||||||| | ||||| || |||||| ||||| Sbjct 3706 CCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACGTCCACTTGCGTGTTAGC 3647 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC---------- 294 | |||||||||||| |||||||||||||| || ||||||||||| Sbjct 3646 ACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCACTGGTCTCTGCGGCCACCACACCCT 3587 Query 295 -------------TGTCATA---GACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTT 338 || ||| | ||| ||||||||||| ||||||||||| ||||| Sbjct 3586 TTCCCAAGCAAGTTGGTATAAGCGGATGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTT 3527 Query 339 TGCCGAGTTCCTTAAC 354 ||||||||||||| || Sbjct 3526 TGCCGAGTTCCTTCAC 3511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062043469184