Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq14733 475 1e-131 >seq14733 Length=4620 Score = 475 bits (526), Expect = 1e-131 Identities = 411/502 (82%), Gaps = 12/502 (2%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| | |||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 524 TACGGCCGCAAGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGCGGAGCAT 583 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCT-GACCCCT 119 | || ||||||||| |||||||||||||||||||||| |||||||| | || | Sbjct 584 GCGGATTAATTCGATGCAACGCGAAGAACCTTACCAAGGCTTGACATATACGAGAACGGG 643 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGA-GTG-ACAGGTGATGCATGGTTGTCGT 177 | ||| || ||| | ||| || ||| || ||||||| |||||||||||||| Sbjct 644 CCAGAAAT---GGTCAACTCTTTGG---ACACTCGTATACAGGTGGTGCATGGTTGTCGT 697 Query 178 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGT 237 ||||||||||||||||||||| |||||||||| ||||||||||||||||| || || Sbjct 698 CAGCTCGTGTCGTGAGATGTTCGGTTAAGTCCGGCAACGAGCGCAACCCTCGTCCTATGT 757 Query 238 TGCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTG 295 ||||| || ||| | |||| |||| | ||||||| | ||| |||||||||||| Sbjct 758 TGCCAGCACGTTATGGTGGGAACTCATGGGATACTGCCGTGGTCAACACGGAGGAAGGTG 817 Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 |||| |||||||||||||||||||||||||| ||||||| ||| | ||||||||||| | Sbjct 818 GGGATGACGTCAAATCATCATGCCCCTTATGTCTTGGGCTTCACGCATGCTACAATGGCC 877 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 ||||||||||| |||| |||||||||| ||| ||||||| ||||| | |||||||||| Sbjct 878 GATACAAAGGGCTGCGATACCGCGAGGTGGAGCGAATCCCAAAAAGTCGGTCTCAGTTCG 937 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-A 474 ||||| |||||||||||||| |||||| ||| ||||||||||||| |||||||| | Sbjct 938 GATTGGGGTCTGCAACTCGACCCCATGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCAA 997 Query 475 TGCTACGGTGAATACGTTCCCG 496 ||| ||||||||||||||||| Sbjct 998 CGCTGCGGTGAATACGTTCCCG 1019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503495272640