Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq14733 197 3e-48 >seq14733 Length=4620 Score = 197 bits (218), Expect = 3e-48 Identities = 232/312 (74%), Gaps = 5/312 (2%) Strand=Plus/Plus Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAAC- 88 |||||||| ||| |||| | ||||| |||| || | || | ||||| |||||| Sbjct 3991 ACGCCAGTGTTCGTGGAGTCATTGTTGAAATACCACTCTGGTCATTCTGGATATCTAACT 4050 Query 89 -CGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTC 147 ||||| | | | | | ||||||||| | | ||| ||||| ||||||||||| Sbjct 4051 ACGGACCCTG---ATCGGGTCTTGGGACAGTGCCTGGTGGGTAGTTTAACTGGGGCGGTT 4107 Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCG 207 |||||||||| |||||||||||||||||||| | |||||| | ||| ||| || || | | Sbjct 4108 GCCTCCCAAAAAGTAACGGAGGCGCCCAAAGGTTCCCTCAACCTGGTTGGCAATCAGGTG 4167 Query 208 CACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAA 267 |||| || ||| ||||| | ||||||| || || || ||| ||||||||||||| Sbjct 4168 GCGAGTGTAAGTGCACAAGGGAGCTTGACTGTGAGACTGACAGGTCGAGCAGGGACGAAA 4227 Query 268 GTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCT 327 |||||| || ||||||||| ||| ||||| || ||||||| ||||||||||| | Sbjct 4228 GTCGGGACTAGTGATCCGGCAGTGGCTTGTGGAAGCGCTGTCGCTCAACGGATAAAAGGT 4287 Query 328 ACCCTGGGGATA 339 ||| ||||||| Sbjct 4288 ACCTCGGGGATA 4299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982070316384