Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq14733 71.6 1e-10 >seq14733 Length=4620 Score = 71.6 bits (78), Expect = 1e-10 Identities = 90/121 (74%), Gaps = 6/121 (5%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCA---CCGGATCACTATGAC 57 ||||||||||||||||||||| || |||||| || ||||| ||||||||||| | Sbjct 4288 TACCTTTTATCCGTTGAGCGACAGCGCTTCCA--CA-AGCCACTGCCGGATCACTAGTCC 4232 Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117 | |||||| |||||| | ||| |||| || |||||| | ||| ||| || ||| Sbjct 4231 CGACTTTCGTCCCTGCTCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTACAC 4172 Query 118 T 118 | Sbjct 4171 T 4171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351889255300