Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq20001 105 1e-20 >seq20001 Length=1809 Score = 105 bits (116), Expect = 1e-20 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 156 TATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGA 215 |||||| |||||||||||||||||||||| ||| |||||||||||| ||| ||||| | Sbjct 1809 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGG 1750 Query 216 CCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACC 275 | |||||||| | ||| || |||| | || |||| ||| ||||| | || || | | Sbjct 1749 TCACCCTCTCAGGCCGGCTACCCGTCGTCGCCTTGGTGAGCCATTACCTCACCAACAAGC 1690 Query 276 TAATGGAACGCATCCCCATCGTACACCGATGAATCTTT 313 | || | ||| ||||| |||||| ||||||| Sbjct 1689 TGATAGGCCGCGAGTCCATCCCGAACCGATAAATCTTT 1652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068441321408