Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_031076.1 Length=38071 Score E Sequences producing significant alignments: (Bits) Value seq18931 82.4 2e-11 >seq18931 Length=1323 Score = 82.4 bits (90), Expect = 2e-11 Identities = 135/191 (71%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 34984 CGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCT-CGGTGT-GGCGTCAGCCGGCC 35041 ||| ||| |||||||||||| |||||||| ||| || | | |||| || || Sbjct 793 CGACTGGTCGGACGGCGAGGCGCTGTTCCTCGGTTGCCGCGCTTTCGGCG--AGTACGCG 850 Query 35042 GAGAACGTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACGTCTCCGG 35101 || ||| | |||| ||||| ||||||||| ||| |||||||||||||| |||||| Sbjct 851 GACAACATCGCCGCGTCGCTCACCAAGGGCACGCGAGTGATCGTCCAGGGCCGTCTCACC 910 Query 35102 GCGCGCAGCTACGACGACCGCGACGGAAACCGTCGCACTGTGATCGGGATCGAAGTCGAT 35161 |||||||||| |||| | | || | | ||||| | ||| |||| ||||| Sbjct 911 CAGCGCAGCTACACCGACAACCAGGGGCAGCAGCGCACCTCGCTCGACCTCGAGGTCGAA 970 Query 35162 GACGTGGGCCC 35172 || || ||||| Sbjct 971 GAGGTCGGCCC 981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121657098721014