Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20angaria_20[genbank_20GCA_5F000165025.1_202010-10- 26] 33,559 sequences; 79,761,545 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq17077 87.8 3e-12 >seq17077 Length=1461 Score = 87.8 bits (96), Expect = 3e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 196781 TCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCG 196840 || || ||||| || ||||| ||| || ||||||||||| || |||||||| ||||| Sbjct 1315 TCGTGCCAGCTCTACCAGCGCTCTGCCGACATGTTCCTCGGGGTGCCGTTCAATATCGCC 1374 Query 196841 TCTTACGCATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGAGTTC 196900 || ||||| |||| | | |||||| ||||| ||| | | || ||||||||| Sbjct 1375 TCCTACGCGCTGCTTACGCTCATGGTCGCGCAGCAGACCGGGCTCGAGCCCGGCGAGTTC 1434 Query 196901 GTTTGGACTGGCGGTGAC 196918 || ||||| ||||| ||| Sbjct 1435 GTCTGGACCGGCGGCGAC 1452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771218747607480