Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq369 73.4 5e-11 >seq369 Length=46607 Score = 73.4 bits (80), Expect = 5e-11 Identities = 84/111 (76%), Gaps = 3/111 (3%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 ||||||| ||||||||| | || | |||||||| ||||||||||| | | ||| | Sbjct 38568 TCTAGAA-CCAACAAAAA--GAACCGAAGTCCTATTTCATTATTCCATGATGAGCTATAC 38512 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115 || ||||||| ||||| |||||| |||| |||||||||| | |||| Sbjct 38511 AAGCAAAAGCCTGTTTTGAGCACTCTGATTTATTCAAGGTAAACCTGCTGG 38461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595180943370